RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 LHX3Q9UBR4 397 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 KLQ9UEF7 1012 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 COQ6Q9Y2Z9 468 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 OR1A2Q9Y585 309 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 FHOD1Q9Y613 1164 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 HECTD1Q9ULT8 2610 aa9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 UBR5O95071 2799 aaPredicted RBP9.92□□□□□ -0.82
TRAFD1-207ENST00000550051 TMEM202A6NGA9 273 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 C9orf172C9J069 976 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 F8VZ95 297 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 B4GAT1O43505 415 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 BUB1BO60566 1050 aaPredicted RBP9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 KRT3P12035 628 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 ITIH1P19827 911 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 KELP23276 732 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 EPHB2P29323 1055 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 RFC1P35251 1148 aaPredicted RBP9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 ETV5P41161 510 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 CSNK1DP48730 415 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 KIAA1024LP59773 190 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 B4GALNT1Q00973 533 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 CDR2Q01850 454 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 PTP4A2Q12974 167 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 ARHGEF7Q14155 803 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 HLTFQ14527 1009 aaKnown RBP eCLIP9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 CDO1Q16878 200 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 TPD52L1Q16890 204 aaPredicted RBP9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 C14orf28Q4W4Y0 310 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 COLEC12Q5KU26 742 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 TMEM164Q5U3C3 297 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 KCTD16Q68DU8 428 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 ERAP2Q6P179 960 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 NYAP1Q6ZVC0 841 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 SPRED1Q7Z699 444 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 TAF8Q7Z7C8 310 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 SLFN11Q7Z7L1 901 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 PIM3Q86V86 326 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 C17orf82Q86X59 251 aaPredicted RBP9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 ZFAND4Q86XD8 727 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 CCDC185Q8N715 623 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 Q8N9G6 341 aaPredicted RBP9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 OR56A4Q8NGH8 313 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 JOSD2Q8TAC2 188 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 OR1E3Q8WZA6 343 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 TUBGCP5Q96RT8 1024 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 SLC25A18Q9H1K4 315 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 ADNPQ9H2P0 1102 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 NOCTQ9UK39 431 aaKnown RBP9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 RNF215Q9Y6U7 377 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 ANKRD36A6QL64 1941 aa9.91□□□□□ -0.82
TRAFD1-207ENST00000550051 RASA4BC9J798 803 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 CACNB4O00305 520 aaPredicted RBP9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 PDE2AO00408 941 aaPredicted RBP9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 RASA4O43374 803 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 PPFIA2O75334 1257 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 CPNE6O95741 557 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 CHRNB2P17787 502 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 WT1P19544 449 aaPredicted RBP9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 ERCC5P28715 1186 aaPredicted RBP9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 MMP12P39900 470 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 STAT1P42224 750 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 AIF1P55008 147 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 GSCP56915 257 aaPredicted RBP9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 POLR2LP62875 67 aaKnown RBP9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 NFKB2Q00653 900 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 FMO1Q01740 532 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 SQSTM1Q13501 440 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 NR1D2Q14995 579 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 AFMIDQ63HM1 303 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 TRIM72Q6ZMU5 477 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 TMPRSS9Q7Z410 1059 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 ZNF354CQ86Y25 554 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 PYROXD2Q8N2H3 581 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 NETO2Q8NC67 525 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 PLA2G15Q8NCC3 412 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 SLC30A5Q8TAD4 765 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 FAM172AQ8WUF8 416 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 FUBP1Q96AE4 644 aaKnown RBP9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 ECHDC3Q96DC8 303 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 PDXPQ96GD0 296 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 NCAPGQ9BPX3 1015 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 FUCA2Q9BTY2 467 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 SLC12A9Q9BXP2 914 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 TRIM4Q9C037 500 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 TMEM168Q9H0V1 697 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 SEMA6CQ9H3T2 930 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 DPEP2Q9H4A9 486 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 LRRC19Q9H756 370 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 CATSPERBQ9H7T0 1116 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 PDFQ9HBH1 243 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 DONSONQ9NYP3 566 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 FOXJ2Q9P0K8 574 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 ATP8A1Q9Y2Q0 1164 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 PCDHGA3Q9Y5H0 932 aa9.9□□□□□ -0.82
TRAFD1-207ENST00000550051 BSNQ9UPA5 3926 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 FAM170AA1A519 330 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 SIGLEC16A6NMB1 481 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 HGSO14964 777 aaPredicted RBP9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 ZW10O43264 779 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 RECQL5O94762 991 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms