RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 B4GALT6Q9UBX8 382 aa16■□□□□ 0.15
COX6A1-203ENST00000550009 CSNK1G3Q9Y6M4 447 aa16■□□□□ 0.15
COX6A1-203ENST00000550009 NEMP2A6NFY4 417 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 H3BM21 787 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 ALPPL2P10696 532 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 SERPINA4P29622 427 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 SSR1P43307 286 aaKnown RBP15.99■□□□□ 0.15
COX6A1-203ENST00000550009 CDH6P55285 790 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 PPARDQ03181 441 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 NFATC4Q14934 902 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 CFAP58Q5T655 872 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 TMCO4Q5TGY1 634 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 DENND2CQ68D51 928 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 ZCCHC8Q6NZY4 707 aaKnown RBP15.99■□□□□ 0.15
COX6A1-203ENST00000550009 BRAT1Q6PJG6 821 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 TMCO3Q6UWJ1 677 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 TSPAN33Q86UF1 283 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 PSTKQ8IV42 348 aaKnown RBP15.99■□□□□ 0.15
COX6A1-203ENST00000550009 NIPA2Q8N8Q9 360 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 KYQ8NBH2 561 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 PCDH19Q8TAB3 1148 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 MAPK15Q8TD08 544 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 PDCD6IPQ8WUM4 868 aaKnown RBP15.99■□□□□ 0.15
COX6A1-203ENST00000550009 TRIM11Q96F44 468 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 NAF1Q96HR8 494 aaKnown RBP15.99■□□□□ 0.15
COX6A1-203ENST00000550009 PSKH2Q96QS6 385 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 IL12RB2Q99665 862 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 FGF22Q9HCT0 170 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 SPASTQ9UBP0 616 aa15.99■□□□□ 0.15
COX6A1-203ENST00000550009 LUC7L2Q9Y383 392 aaKnown RBP15.99■□□□□ 0.15
COX6A1-203ENST00000550009 KALRNO60229 2985 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 A0A087WV48 116 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 EME2A4GXA9 379 aaPredicted RBP15.98■□□□□ 0.15
COX6A1-203ENST00000550009 EIF3CLB5ME19 914 aaKnown RBP15.98■□□□□ 0.15
COX6A1-203ENST00000550009 AGRPO00253 132 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 USP12O75317 370 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 FUCA1P04066 466 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 PDHA1P08559 390 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 CTPS1P17812 591 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 LHCGRP22888 699 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 ARL4AP40617 200 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 HK3P52790 923 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 SRP54P61011 504 aaKnown RBP15.98■□□□□ 0.15
COX6A1-203ENST00000550009 YPEL5P62699 121 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 E2F1Q01094 437 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 NSUN2Q08J23 767 aaKnown RBP eCLIP15.98■□□□□ 0.15
COX6A1-203ENST00000550009 DPYSL3Q14195 570 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 PTK2BQ14289 1009 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 PIGHQ14442 188 aaPredicted RBP15.98■□□□□ 0.15
COX6A1-203ENST00000550009 CNGA3Q16281 694 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 SOWAHCQ53LP3 525 aaPredicted RBP15.98■□□□□ 0.15
COX6A1-203ENST00000550009 BOLA3Q53S33 107 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 HS1BP3Q53T59 392 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 C6orf132Q5T0Z8 1188 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 NCBP2-AS2Q69YL0 99 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 ERAP2Q6P179 960 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 DPPA4Q7L190 304 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 HSD11B1LQ7Z5J1 315 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 ZSCAN30Q86W11 494 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 ZNF564Q8TBZ8 553 aaPredicted RBP15.98■□□□□ 0.15
COX6A1-203ENST00000550009 HCAR2Q8TDS4 363 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 ATXN7L3BQ96GX2 97 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 EIF3CQ99613 913 aaKnown RBP15.98■□□□□ 0.15
COX6A1-203ENST00000550009 DUSP23Q9BVJ7 150 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 SLC13A1Q9BZW2 595 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 NRSN2Q9GZP1 204 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 SUDS3Q9H7L9 328 aaPredicted RBP15.98■□□□□ 0.15
COX6A1-203ENST00000550009 NT5MQ9NPB1 228 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 GULP1Q9UBP9 304 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 SEPT3Q9UH03 358 aa15.98■□□□□ 0.15
COX6A1-203ENST00000550009 NPIPB15A6NHN6 443 aaPredicted RBP15.97■□□□□ 0.15
COX6A1-203ENST00000550009 TMEM110-MUSTN1A8MSY1 372 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 LMO7DNF2Z398 122 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 GOLGA6L19H0YKK7 550 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 HTRA2O43464 458 aaPredicted RBP15.97■□□□□ 0.15
COX6A1-203ENST00000550009 ANXA6P08133 673 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 ALPIP09923 528 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 ELFN1P0C7U0 828 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 CDK4P11802 303 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 PDX1P52945 283 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 CCDC173Q0VFZ6 552 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 SLC10A2Q12908 348 aaPredicted RBP15.97■□□□□ 0.15
COX6A1-203ENST00000550009 KRT81Q14533 505 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 ZNF235Q14590 738 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 GRM3Q14832 879 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 ACAP1Q15027 740 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 NR0B2Q15466 257 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 ASTE1Q2TB18 679 aaPredicted RBP15.97■□□□□ 0.15
COX6A1-203ENST00000550009 FAM71BQ8TC56 605 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 TEKT4Q8WW24 435 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 COQ10AQ96MF6 247 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 CHP1Q99653 195 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 MGME1Q9BQP7 344 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 C1QTNF7Q9BXJ2 289 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 SCUBE2Q9NQ36 999 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 IP6K2Q9UHH9 426 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 SALL4Q9UJQ4 1053 aa15.97■□□□□ 0.15
COX6A1-203ENST00000550009 BZW2Q9Y6E2 419 aaKnown RBP15.97■□□□□ 0.15
COX6A1-203ENST00000550009 TPM4P67936 248 aa15.96■□□□□ 0.15
COX6A1-203ENST00000550009 GABREP78334 506 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms