RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 GFM2Q969S9 779 aaKnown RBP15.07■□□□□ 0
CUX1-214ENST00000550008 RNF145Q96MT1 663 aa15.07■□□□□ 0
CUX1-214ENST00000550008 IGSF9Q9P2J2 1179 aa15.07■□□□□ 0
CUX1-214ENST00000550008 FGF1P05230 155 aa15.06■□□□□ 0
CUX1-214ENST00000550008 PSME3P61289 254 aa15.06■□□□□ 0
CUX1-214ENST00000550008 FRG1Q14331 258 aaKnown RBP15.06■□□□□ 0
CUX1-214ENST00000550008 MARK2Q7KZI7 788 aaKnown RBP15.06■□□□□ 0
CUX1-214ENST00000550008 TRMT11Q7Z4G4 463 aaKnown RBP15.06■□□□□ 0
CUX1-214ENST00000550008 LRRC49Q8IUZ0 686 aa15.06■□□□□ 0
CUX1-214ENST00000550008 ARFGAP1Q8N6T3 406 aa15.06■□□□□ 0
CUX1-214ENST00000550008 CIDEBQ9UHD4 219 aa15.06■□□□□ 0
CUX1-214ENST00000550008 KANSL1LA0AUZ9 987 aa15.06■□□□□ 0
CUX1-214ENST00000550008 NELFEP18615 380 aaKnown RBP15.06■□□□□ 0
CUX1-214ENST00000550008 PROZP22891 400 aa15.06■□□□□ 0
CUX1-214ENST00000550008 PRKAA2P54646 552 aa15.06■□□□□ 0
CUX1-214ENST00000550008 GHRHRQ02643 423 aa15.06■□□□□ 0
CUX1-214ENST00000550008 RALGDSQ12967 914 aa15.06■□□□□ 0
CUX1-214ENST00000550008 CPSF6Q16630 551 aaKnown RBP eCLIP15.06■□□□□ 0
CUX1-214ENST00000550008 ARL14EPQ8N8R7 260 aaPredicted RBP15.06■□□□□ 0
CUX1-214ENST00000550008 PNPLA1Q8N8W4 532 aa15.06■□□□□ 0
CUX1-214ENST00000550008 HEXDCQ8WVB3 486 aa15.06■□□□□ 0
CUX1-214ENST00000550008 C7orf26Q96N11 449 aa15.06■□□□□ 0
CUX1-214ENST00000550008 TSPAN18Q96SJ8 248 aa15.06■□□□□ 0
CUX1-214ENST00000550008 SLC25A51Q9H1U9 297 aa15.06■□□□□ 0
CUX1-214ENST00000550008 TNKS2Q9H2K2 1166 aa15.06■□□□□ 0
CUX1-214ENST00000550008 DNAJB4Q9UDY4 337 aa15.06■□□□□ 0
CUX1-214ENST00000550008 TRAF6Q9Y4K3 522 aa15.06■□□□□ 0
CUX1-214ENST00000550008 CCDC154A6NI56 674 aa15.06■□□□□ 0
CUX1-214ENST00000550008 FKTNO75072 461 aa15.06■□□□□ 0
CUX1-214ENST00000550008 GPR32O75388 356 aa15.06■□□□□ 0
CUX1-214ENST00000550008 ANPEPP15144 967 aa15.06■□□□□ 0
CUX1-214ENST00000550008 LBPP18428 481 aa15.06■□□□□ 0
CUX1-214ENST00000550008 HLA-DPA1P20036 260 aa15.06■□□□□ 0
CUX1-214ENST00000550008 SLC1A2P43004 574 aa15.06■□□□□ 0
CUX1-214ENST00000550008 GSSP48637 474 aa15.06■□□□□ 0
CUX1-214ENST00000550008 GNA12Q03113 381 aa15.06■□□□□ 0
CUX1-214ENST00000550008 MSLNQ13421 630 aaPredicted RBP15.06■□□□□ 0
CUX1-214ENST00000550008 PABPC1LQ4VXU2 614 aaKnown RBP15.06■□□□□ 0
CUX1-214ENST00000550008 LRRC73Q5JTD7 316 aa15.06■□□□□ 0
CUX1-214ENST00000550008 LPCAT4Q643R3 524 aa15.06■□□□□ 0
CUX1-214ENST00000550008 DOK6Q6PKX4 331 aa15.06■□□□□ 0
CUX1-214ENST00000550008 RPS27LQ71UM5 84 aaKnown RBP15.06■□□□□ 0
CUX1-214ENST00000550008 IRGQQ8WZA9 623 aa15.06■□□□□ 0
CUX1-214ENST00000550008 TRIB2Q92519 343 aa15.06■□□□□ 0
CUX1-214ENST00000550008 SIKE1Q9BRV8 207 aa15.06■□□□□ 0
CUX1-214ENST00000550008 TMEM79Q9BSE2 394 aa15.06■□□□□ 0
CUX1-214ENST00000550008 VPS45Q9NRW7 570 aa15.06■□□□□ 0
CUX1-214ENST00000550008 SH3BP4Q9P0V3 963 aa15.06■□□□□ 0
CUX1-214ENST00000550008 OPTCQ9UBM4 332 aa15.06■□□□□ 0
CUX1-214ENST00000550008 CNTN6Q9UQ52 1028 aa15.06■□□□□ 0
CUX1-214ENST00000550008 RAI2Q9Y5P3 530 aa15.06■□□□□ 0
CUX1-214ENST00000550008 SMCHD1A6NHR9 2005 aa15.06■□□□□ 0
CUX1-214ENST00000550008 SCN9AQ15858 1988 aa15.06■□□□□ 0
CUX1-214ENST00000550008 ACVRL1P37023 503 aa15.06■□□□□ 0
CUX1-214ENST00000550008 TRAF2Q12933 501 aa15.06■□□□□ 0
CUX1-214ENST00000550008 PTPRCAPQ14761 206 aa15.06■□□□□ 0
CUX1-214ENST00000550008 DPY19L2P1Q6NXN4 242 aa15.06■□□□□ 0
CUX1-214ENST00000550008 FBXL22Q6P050 247 aa15.06■□□□□ 0
CUX1-214ENST00000550008 OR13C4Q8NGS5 318 aa15.06■□□□□ 0
CUX1-214ENST00000550008 GPR21Q99679 349 aa15.06■□□□□ 0
CUX1-214ENST00000550008 ZBTB42B2RXF5 422 aa15.05■□□□□ 0
CUX1-214ENST00000550008 CNTN5O94779 1100 aa15.05■□□□□ 0
CUX1-214ENST00000550008 PAX7P23759 505 aa15.05■□□□□ 0
CUX1-214ENST00000550008 PPIDQ08752 370 aaKnown RBP15.05■□□□□ 0
CUX1-214ENST00000550008 ACOX1Q15067 660 aa15.05■□□□□ 0
CUX1-214ENST00000550008 OTULINQ96BN8 352 aa15.05■□□□□ 0
CUX1-214ENST00000550008 CFAP97Q9P2B7 532 aa15.05■□□□□ 0
CUX1-214ENST00000550008 PTGESO14684 152 aa15.05■□□□□ -0
CUX1-214ENST00000550008 MSH3P20585 1137 aa15.05■□□□□ -0
CUX1-214ENST00000550008 GLUD2P49448 558 aa15.05■□□□□ -0
CUX1-214ENST00000550008 NAPRTQ6XQN6 538 aa15.05■□□□□ -0
CUX1-214ENST00000550008 FBXO22Q8NEZ5 403 aa15.05■□□□□ -0
CUX1-214ENST00000550008 KBTBD7Q8WVZ9 684 aa15.05■□□□□ -0
CUX1-214ENST00000550008 TMEM159Q96B96 161 aa15.05■□□□□ -0
CUX1-214ENST00000550008 THAP11Q96EK4 314 aa15.05■□□□□ -0
CUX1-214ENST00000550008 FCF1Q9Y324 198 aaKnown RBP15.05■□□□□ -0
CUX1-214ENST00000550008 RAD54BQ9Y620 910 aa15.05■□□□□ -0
CUX1-214ENST00000550008 ARL5AQ9Y689 179 aa15.05■□□□□ -0
CUX1-214ENST00000550008 PCDH8O95206 1070 aa15.05■□□□□ -0
CUX1-214ENST00000550008 GJA1P17302 382 aa15.05■□□□□ -0
CUX1-214ENST00000550008 HNRNPDQ14103 355 aaKnown RBP15.05■□□□□ -0
CUX1-214ENST00000550008 SPRED3Q2MJR0 410 aa15.05■□□□□ -0
CUX1-214ENST00000550008 ATXN7L2Q5T6C5 722 aaPredicted RBP15.05■□□□□ -0
CUX1-214ENST00000550008 BBS2Q9BXC9 721 aa15.05■□□□□ -0
CUX1-214ENST00000550008 EMILIN2Q9BXX0 1053 aa15.05■□□□□ -0
CUX1-214ENST00000550008 IGFLR1Q9H665 355 aa15.05■□□□□ -0
CUX1-214ENST00000550008 WASF2Q9Y6W5 498 aa15.05■□□□□ -0
CUX1-214ENST00000550008 IQCF5A8MTL0 148 aa15.04■□□□□ -0
CUX1-214ENST00000550008 ACSL4O60488 711 aa15.04■□□□□ -0
CUX1-214ENST00000550008 KRT6AP02538 564 aa15.04■□□□□ -0
CUX1-214ENST00000550008 KRT6BP04259 564 aa15.04■□□□□ -0
CUX1-214ENST00000550008 SNRPB2P08579 225 aaKnown RBP15.04■□□□□ -0
CUX1-214ENST00000550008 KRT6CP48668 564 aa15.04■□□□□ -0
CUX1-214ENST00000550008 SLC7A2P52569 658 aa15.04■□□□□ -0
CUX1-214ENST00000550008 TIGD2Q4W5G0 525 aa15.04■□□□□ -0
CUX1-214ENST00000550008 CCDC81Q6ZN84 652 aa15.04■□□□□ -0
CUX1-214ENST00000550008 FAM120BQ96EK7 910 aaKnown RBP15.04■□□□□ -0
CUX1-214ENST00000550008 NSMCE2Q96MF7 247 aa15.04■□□□□ -0
CUX1-214ENST00000550008 PRPF18Q99633 342 aaKnown RBP15.04■□□□□ -0
CUX1-214ENST00000550008 VRTNQ9H8Y1 702 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms