RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 TRAFD1O14545 582 aaPredicted RBP17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 ALPIP09923 528 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 TCF4P15884 667 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 HTR1BP28222 390 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 PCK1P35558 622 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 ZNF165P49910 485 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 KIAA1024LP59773 190 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 AP1S1P61966 158 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 DPYSL2Q16555 572 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 TMCO4Q5TGY1 634 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 DPPA4Q7L190 304 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 SPOCK2Q92563 424 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 GRAMD1AQ96CP6 724 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 WDR92Q96MX6 357 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 PSKH2Q96QS6 385 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 KLQ9UEF7 1012 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 PADI4Q9UM07 663 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 SCN8AQ9UQD0 1980 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 MGAQ8IWI9 3026 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 NTN3O00634 580 aaPredicted RBP17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 ATXN7O15265 892 aaPredicted RBP17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 RECQL5O94762 991 aaPredicted RBP17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 ELFN1P0C7U0 828 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 MYBL1P10243 752 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 SKILP12757 684 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 SRP54P61011 504 aaKnown RBP17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 BCL2L1Q07817 233 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 NSUN2Q08J23 767 aaKnown RBP eCLIP17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 SLC10A7Q0GE19 358 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 LBRQ14739 615 aaKnown RBP17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 IQCB1Q15051 598 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 SMTNL2Q2TAL5 461 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 FIGNQ5HY92 759 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 ESRP1Q6NXG1 681 aaKnown RBP17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 CAVIN1Q6NZI2 390 aaKnown RBP17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 LVRNQ6Q4G3 990 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 ENPP7Q6UWV6 458 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 LIPIQ6XZB0 460 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 WDR48Q8TAF3 677 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 PRR11Q96HE9 360 aaPredicted RBP17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 NAF1Q96HR8 494 aaKnown RBP17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 ZNF599Q96NL3 588 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 RBM15Q96T37 977 aaKnown RBP eCLIP17.48■□□□□ 0.391e-7■■■□□ 17.3
CHMP1A-205ENST00000548650 FUCA2Q9BTY2 467 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 ISCUQ9H1K1 167 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 ZWILCHQ9H900 591 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 FGF22Q9HCT0 170 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 THSD1Q9NS62 852 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 SIRPGQ9P1W8 387 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 MYO1AQ9UBC5 1043 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 SEPT3Q9UH03 358 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 RABGEF1Q9UJ41 708 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 PCDHGA8Q9Y5G5 932 aa17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 ARHGEF17Q96PE2 2063 aaPredicted RBP17.48■□□□□ 0.39
CHMP1A-205ENST00000548650 KALRNO60229 2985 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 H3BRJ5 948 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 PEX11BO96011 259 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 CR2P20023 1033 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 SCNN1BP51168 640 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 SPIDRQ14159 915 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 HGSNATQ68CP4 663 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 GPR155Q7Z3F1 870 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 RD3Q7Z3Z2 195 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 SDR16C5Q8N3Y7 309 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 LZTR1Q8N653 840 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 ATL2Q8NHH9 583 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 KCNE4Q8WWG9 221 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 OR1E3Q8WZA6 343 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 FUBP1Q96AE4 644 aaKnown RBP17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 CCDC74AQ96AQ1 378 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 SYNDIG1Q9H7V2 258 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 MRPL47Q9HD33 250 aaKnown RBP17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 ETNK2Q9NVF9 386 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 GULP1Q9UBP9 304 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 DOLKQ9UPQ8 538 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 DGKBQ9Y6T7 804 aa17.47■□□□□ 0.39
CHMP1A-205ENST00000548650 CFAP46Q8IYW2 2715 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 TEX51A0A1B0GUA7 166 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 TMEM202A6NGA9 273 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 EIF4E1BA6NMX2 242 aaKnown RBP17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 PRB1P04280 392 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 CTSEP14091 401 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 RENBPP51606 427 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 CXADRP78310 365 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 SKOR1P84550 965 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 ZNF235Q14590 738 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 NR1I3Q14994 352 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 TXNRD3NBQ6F5E7 133 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 TMCO3Q6UWJ1 677 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 POLNQ7Z5Q5 900 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 GKN2Q86XP6 184 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 PELI3Q8N2H9 469 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 PGBD5Q8N414 524 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 SCG3Q8WXD2 468 aaKnown RBP17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 SLC46A1Q96NT5 459 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 CSPG4P5Q96PW8 444 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 B4GALT6Q9UBX8 382 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 GPR34Q9UPC5 381 aa17.46■□□□□ 0.39
CHMP1A-205ENST00000548650 HELZ2Q9BYK8 2649 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms