RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 C19orf43Q9BQ61 176 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 HDAC8Q9BY41 377 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 MFSD1Q9H3U5 465 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 CD320Q9NPF0 282 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 PIH1D1Q9NWS0 290 aaKnown RBP15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 SYBUQ9NX95 663 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 RIMKLBQ9ULI2 386 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 SOX13Q9UN79 622 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 EYSQ5T1H1 3165 aa15.91■□□□□ 0.14
TRAFD1-203ENST00000547063 ATG2BQ96BY7 2078 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 A0A1W2PQF6 199 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 ANTXRLA6NF34 631 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 PAPSS2O95340 614 aaPredicted RBP15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 DNTTP04053 509 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 C7P10643 843 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 ZNF30P17039 623 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 PAMP19021 973 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 SLC8A1P32418 973 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 PSMD8P48556 350 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 ELP6Q0PNE2 266 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 MTM1Q13496 603 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 SEPT6Q14141 434 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 CRY1Q16526 586 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 TTC31Q49AM3 519 aaPredicted RBP15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 PKN3Q6P5Z2 889 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 ERN2Q76MJ5 926 aaKnown RBP15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 GLT6D1Q7Z4J2 308 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 TTC7BQ86TV6 843 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 ANKMY2Q8IV38 441 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 PJA1Q8NG27 643 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 EDAQ92838 391 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 CLDN23Q96B33 292 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 UHRF1Q96T88 793 aaPredicted RBP15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 KIFC1Q9BW19 673 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 TXLNGYQ9BZA5 131 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 FOXQ1Q9C009 403 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 PABPC3Q9H361 631 aaKnown RBP15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 CDC42EP4Q9H3Q1 356 aaKnown RBP15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 SARDHQ9UL12 918 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 CHMP2BQ9UQN3 213 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 TCAF1Q9Y4C2 921 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 PRUNE2Q8WUY3 3088 aa15.9■□□□□ 0.14
TRAFD1-203ENST00000547063 DCXO43602 365 aa15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 USP1O94782 785 aa15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 ALDH1A2O94788 518 aa15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 COPAP53621 1224 aa15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 RPS14P62263 151 aaKnown RBP15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 MSLNQ13421 630 aaPredicted RBP15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 SKIDA1Q1XH10 827 aa15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 SPANXN3Q5MJ09 141 aa15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 BEND6Q5SZJ8 279 aaPredicted RBP15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 DENND2CQ68D51 928 aa15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 KIAA1211LQ6NV74 962 aa15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 FBXO38Q6PIJ6 1188 aa15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 TMEM135Q86UB9 458 aa15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 TMPRSS6Q8IU80 811 aa15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 GABPB2Q8TAK5 448 aaPredicted RBP15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 SIPA1Q96FS4 1042 aa15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 C9orf72Q96LT7 481 aa15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 GPR63Q9BZJ6 419 aa15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 SIT1Q9Y3P8 196 aa15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 ZNF711Q9Y462 761 aa15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 MTF2Q9Y483 593 aaPredicted RBP15.89■□□□□ 0.13
TRAFD1-203ENST00000547063 BANF1O75531 89 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 ABHD2P08910 425 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 ACADMP11310 421 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 ADRB3P13945 408 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 TIMP2P16035 220 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 CTPS1P17812 591 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 LPOP22079 712 aaPredicted RBP15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 VIPR1P32241 457 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 HNF1BP35680 557 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 ABL2P42684 1182 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 FAM193AP78312 1265 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 CRADDP78560 199 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 FZD5Q13467 585 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 ARHGEF7Q14155 803 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 FRG1Q14331 258 aaKnown RBP15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 FASTKD3Q14CZ7 662 aaKnown RBP15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 KYNUQ16719 465 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 HP1BP3Q5SSJ5 553 aaPredicted RBP15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 STEAP4Q687X5 459 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 Q6ZS52 159 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 USP30Q70CQ3 517 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 CYS1Q717R9 158 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 PARS2Q7L3T8 475 aaKnown RBP15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 KBTBD6Q86V97 674 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 ZSWIM9Q86XI8 627 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 RAVER1Q8IY67 606 aaKnown RBP15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 MPP5Q8N3R9 675 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 SPEM1Q8N4L4 309 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 STYXQ8WUJ0 223 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 UBLCP1Q8WVY7 318 aaPredicted RBP15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 ARRDC3Q96B67 414 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 OMDQ99983 421 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 CHRDQ9H2X0 955 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 SEMA4AQ9H3S1 761 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 VPS37BQ9H9H4 285 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 ZFYVE1Q9HBF4 777 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms