RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 RALGDSQ12967 914 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 MPP3Q13368 585 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 FGL2Q14314 439 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 STAT4Q14765 748 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 HS1BP3Q53T59 392 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 LIPIQ6XZB0 460 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 USP45Q70EL2 814 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 KLHDC8BQ8IXV7 354 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 C12orf50Q8NA57 414 aaPredicted RBP14.54□□□□□ -0.08
DDX54-203ENST00000546869 PDCD6IPQ8WUM4 868 aaKnown RBP14.54□□□□□ -0.08
DDX54-203ENST00000546869 CENPTQ96BT3 561 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 SPATA13Q96N96 652 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 RBM15Q96T37 977 aaKnown RBP eCLIP14.54□□□□□ -0.08
DDX54-203ENST00000546869 KLF6Q99612 283 aaPredicted RBP14.54□□□□□ -0.08
DDX54-203ENST00000546869 C1QTNF7Q9BXJ2 289 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 CHKBQ9Y259 395 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 ITM2BQ9Y287 266 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 SLCO1B1Q9Y6L6 691 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 CEP192Q8TEP8 1941 aa14.54□□□□□ -0.08
DDX54-203ENST00000546869 USP34Q70CQ2 3546 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 SDK1Q7Z5N4 2213 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 SHROOM3Q8TF72 1996 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 LNP1A1A4G5 178 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 ANXA9O76027 345 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 ITGAVP06756 1048 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 ZNF30P17039 623 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 NFKB1P19838 968 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 VIPR1P32241 457 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 CXCR5P32302 372 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 CSNK1EP49674 416 aaKnown RBP14.53□□□□□ -0.08
DDX54-203ENST00000546869 LIG3P49916 1009 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 LIMK1P53667 647 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 SF3A2Q15428 464 aaKnown RBP14.53□□□□□ -0.08
DDX54-203ENST00000546869 CCDC6Q16204 474 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 LRRC73Q5JTD7 316 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 PAPD7Q5XG87 772 aaKnown RBP14.53□□□□□ -0.08
DDX54-203ENST00000546869 KDELC1Q6UW63 502 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 IL27RAQ6UWB1 636 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 ABI3BPQ7Z7G0 1075 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 DCP2Q8IU60 420 aaKnown RBP14.53□□□□□ -0.08
DDX54-203ENST00000546869 PAF1Q8N7H5 531 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 SPATA22Q8NHS9 363 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 ACTRT1Q8TDG2 376 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 SRPK1Q96SB4 655 aaKnown RBP14.53□□□□□ -0.08
DDX54-203ENST00000546869 OSBPL9Q96SU4 736 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 NAP1L3Q99457 506 aaPredicted RBP14.53□□□□□ -0.08
DDX54-203ENST00000546869 FAM118BQ9BPY3 351 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 GBA3Q9H227 469 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 C10orf88Q9H8K7 445 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 B4GALT6Q9UBX8 382 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 SNX12Q9UMY4 172 aa14.53□□□□□ -0.08
DDX54-203ENST00000546869 AAR2Q9Y312 384 aaKnown RBP14.53□□□□□ -0.08
DDX54-203ENST00000546869 ZNF292O60281 2723 aa14.52□□□□□ -0.08
DDX54-203ENST00000546869 FAM186AA6NE01 2351 aa14.52□□□□□ -0.08
DDX54-203ENST00000546869 WNT9AO14904 365 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 SLC31A1O15431 190 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 DFNA5O60443 496 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 HEXIM1O94992 359 aaKnown RBP14.52□□□□□ -0.09
DDX54-203ENST00000546869 MT-CYBP00156 380 aaPredicted RBP14.52□□□□□ -0.09
DDX54-203ENST00000546869 WNT1P04628 370 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 CFIP05156 583 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 C6P13671 934 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 TCP1P17987 556 aaKnown RBP14.52□□□□□ -0.09
DDX54-203ENST00000546869 HNF1BP35680 557 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 EPHB1P54762 984 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 GEMP55040 296 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 GNG11P61952 73 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 QPCTQ16769 361 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 LONRF2Q1L5Z9 754 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 PARP6Q2NL67 630 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 P3H1Q32P28 736 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 NLRP8Q86W28 1048 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.52□□□□□ -0.09
DDX54-203ENST00000546869 FAM71DQ8N9W8 422 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 C1orf54Q8WWF1 131 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 MRGPRX2Q96LB1 330 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 COQ10AQ96MF6 247 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 SLC6A18Q96N87 628 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 TMEM121Q9BTD3 319 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 MLPHQ9BV36 600 aaPredicted RBP14.52□□□□□ -0.09
DDX54-203ENST00000546869 SMOC1Q9H4F8 434 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 ERVMER34-1Q9H9K5 563 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 MAGEE1Q9HCI5 957 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 AASDHPPTQ9NRN7 309 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 GPR27Q9NS67 375 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 RSPH14Q9UHP6 348 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 ANKRD6Q9Y2G4 727 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 GVINP1Q7Z2Y8 2422 aa14.52□□□□□ -0.09
DDX54-203ENST00000546869 CAPN8A6NHC0 703 aa14.51□□□□□ -0.09
DDX54-203ENST00000546869 NPIPB15A6NHN6 443 aaPredicted RBP14.51□□□□□ -0.09
DDX54-203ENST00000546869 TLR4O00206 839 aa14.51□□□□□ -0.09
DDX54-203ENST00000546869 FPGTO14772 594 aa14.51□□□□□ -0.09
DDX54-203ENST00000546869 NDST3O95803 873 aa14.51□□□□□ -0.09
DDX54-203ENST00000546869 PRKCGP05129 697 aa14.51□□□□□ -0.09
DDX54-203ENST00000546869 ELFN1P0C7U0 828 aa14.51□□□□□ -0.09
DDX54-203ENST00000546869 ENGP17813 658 aa14.51□□□□□ -0.09
DDX54-203ENST00000546869 CTSKP43235 329 aa14.51□□□□□ -0.09
DDX54-203ENST00000546869 WNT3AP56704 352 aa14.51□□□□□ -0.09
DDX54-203ENST00000546869 BNC1Q01954 994 aa14.51□□□□□ -0.09
DDX54-203ENST00000546869 PTSQ03393 145 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms