RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 WFDC12Q8WWY7 111 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 SYN2Q92777 582 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-223ENST00000545440 ARHGEF2Q92974 986 aaKnown RBP7.81□□□□□ -1.16
SNHG1-223ENST00000545440 ISG20Q96AZ6 181 aaKnown RBP7.81□□□□□ -1.16
SNHG1-223ENST00000545440 SKA1Q96BD8 255 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 CATSPERBQ9H7T0 1116 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 IL21RQ9HBE5 538 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 DYRK4Q9NR20 520 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 TM7SF3Q9NS93 570 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 DONSONQ9NYP3 566 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 IL36AQ9UHA7 158 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 DNAI1Q9UI46 699 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 FZD10Q9ULW2 581 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 HPCAL4Q9UM19 191 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 DMTF1Q9Y222 760 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 ANKRD6Q9Y2G4 727 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 SNX11Q9Y5W9 270 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 BZW2Q9Y6E2 419 aaKnown RBP7.81□□□□□ -1.16
SNHG1-223ENST00000545440 SCINQ9Y6U3 715 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 EPG5Q9HCE0 2579 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 CEP295Q9C0D2 2601 aa7.81□□□□□ -1.16
SNHG1-223ENST00000545440 SPEGQ15772 3267 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 USP24Q9UPU5 2620 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 TBC1D3DA0A087WVF3 549 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 TBC1D3IA0A087WXS9 549 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 TBC1D3EA0A087X179 549 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 TBC1D3KA0A087X1G2 549 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 TBC1D3FA6NER0 549 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-223ENST00000545440 WASH4PA8MWX3 477 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 TMCO5BA8MYB1 307 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 TBC1D3LB9A6J9 549 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 PLK4O00444 970 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 KPNA3O00505 521 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-223ENST00000545440 DDX3XO00571 662 aaKnown RBP eCLIP7.8□□□□□ -1.16
SNHG1-223ENST00000545440 YKT6O15498 198 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 SH3BP5O60239 455 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 PCDHGA12O60330 932 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 CBFA2T3O75081 653 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 TRIM16O95361 564 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 CD160O95971 181 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 GSRP00390 522 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 TBC1D3HP0C7X1 549 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 PSMA2P25787 234 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 CD38P28907 300 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 EPHB2P29323 1055 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 ACVRL1P37023 503 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 CCNHP51946 323 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-223ENST00000545440 UBASH3AP57075 661 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 C21orf59P57076 290 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 YBEYP58557 167 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-223ENST00000545440 TAS2R38P59533 333 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 TPI1P60174 286 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 SIM1P81133 766 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-223ENST00000545440 OVGP1Q12889 678 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 MAP7Q14244 749 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 POLD3Q15054 466 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-223ENST00000545440 SKOR2Q2VWA4 1001 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-223ENST00000545440 INAVAQ3KP66 663 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 ZSCAN23Q3MJ62 389 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 POM121L1PQ3SYA9 428 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 PARP15Q460N3 678 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 TBC1D3GQ6DHY5 549 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 TBC1D3CQ6IPX1 549 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 SCYL2Q6P3W7 929 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 LAYNQ6UX15 382 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 DBX2Q6ZNG2 339 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 DPY19L3Q6ZPD9 716 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 GLRX5Q86SX6 157 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 PRPF39Q86UA1 669 aaKnown RBP7.8□□□□□ -1.16
SNHG1-223ENST00000545440 VPS36Q86VN1 386 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 IQCHQ86VS3 1027 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 ZSCAN30Q86W11 494 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 TBC1D3Q8IZP1 549 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-223ENST00000545440 CHST14Q8NCH0 376 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 GIMAP7Q8NHV1 300 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 CASKIN2Q8WXE0 1202 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 ZNF653Q96CK0 615 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 LRIG1Q96JA1 1093 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 SERAC1Q96JX3 654 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 FANCD2OSQ96PS1 177 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 NCAPGQ9BPX3 1015 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 HDAC8Q9BY41 377 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 TNKS2Q9H2K2 1166 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 EBF2Q9HAK2 575 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 MRPL47Q9HD33 250 aaKnown RBP7.8□□□□□ -1.16
SNHG1-223ENST00000545440 AASDHPPTQ9NRN7 309 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 CNOT8Q9UFF9 292 aaKnown RBP7.8□□□□□ -1.16
SNHG1-223ENST00000545440 PCOLCE2Q9UKZ9 415 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 PPT2Q9UMR5 302 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 WASF3Q9UPY6 502 aa7.8□□□□□ -1.16
SNHG1-223ENST00000545440 KMT2BQ9UMN6 2715 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-223ENST00000545440 A0A1B0GTQ1 180 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 SPAARA0A1B0GVQ0 90 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 A0A1W2PR77 199 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 TMEM191CA6NGB0 347 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 PRAMEF26H0Y7S4 382 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 KDELR3O43731 214 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 CREB3O43889 395 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 MAGEC1O60732 1142 aa7.79□□□□□ -1.16
SNHG1-223ENST00000545440 LEFTY1O75610 366 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms