RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 SHROOM3Q8TF72 1996 aa12.61□□□□□ -0.39
ACTN1-206ENST00000544964 ATMQ13315 3056 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 RP1P56715 2156 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 TCRBV7S2A1N4TA0A589 114 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 MAGEC1O60732 1142 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 PRAMEF11O60813 436 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 CD160O95971 181 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 PRNPP04156 253 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 THEGLP0DJG4 465 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 INSM1Q01101 510 aaPredicted RBP12.6□□□□□ -0.39
ACTN1-206ENST00000544964 GALNT2Q10471 571 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 FGL2Q14314 439 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 RTP5Q14D33 572 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 CCDC181Q5TID7 509 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 RETSATQ6NUM9 610 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 NEK5Q6P3R8 708 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 B4GALNT4Q76KP1 1039 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 ERN2Q76MJ5 926 aaKnown RBP12.6□□□□□ -0.39
ACTN1-206ENST00000544964 ATPAF2Q8N5M1 289 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 OR4C6Q8NH72 309 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 VOPP1Q96AW1 172 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 KLHDC7BQ96G42 594 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 CCDC114Q96M63 670 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 FAM118BQ9BPY3 351 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 HDAC8Q9BY41 377 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 NRSN2Q9GZP1 204 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 CARD9Q9H257 536 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 SP110Q9HB58 689 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 IL36AQ9UHA7 158 aa12.6□□□□□ -0.39
ACTN1-206ENST00000544964 IPO11Q9UI26 975 aaKnown RBP12.6□□□□□ -0.39
ACTN1-206ENST00000544964 FANCGO15287 622 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 CEP104O60308 925 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 LEFTY1O75610 366 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 TJP3O95049 919 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 TGM2P21980 687 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 HNRNPA2B1P22626 353 aaKnown RBP12.59□□□□□ -0.39
ACTN1-206ENST00000544964 DGKAP23743 735 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 ITPKBP27987 946 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 AKT2P31751 481 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 GARSP41250 739 aaKnown RBP12.59□□□□□ -0.39
ACTN1-206ENST00000544964 CLDN2P57739 230 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 ARSIQ5FYB1 569 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 FAM182AQ5T1J6 154 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 DCBLD1Q8N8Z6 715 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 CCNYQ8ND76 341 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 P3H4Q92791 437 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 DCBLD2Q96PD2 775 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 NAPGQ99747 312 aaPredicted RBP12.59□□□□□ -0.39
ACTN1-206ENST00000544964 CEP44Q9C0F1 390 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 PDFQ9HBH1 243 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 EFR3BQ9Y2G0 817 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 FCF1Q9Y324 198 aaKnown RBP12.59□□□□□ -0.39
ACTN1-206ENST00000544964 FARP1Q9Y4F1 1045 aaPredicted RBP12.59□□□□□ -0.39
ACTN1-206ENST00000544964 ZNF462Q96JM2 2506 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 LRRK1Q38SD2 2015 aa12.59□□□□□ -0.39
ACTN1-206ENST00000544964 LY6G6EA0A0G2JKS1 128 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 APOC4-APOC2K7ER74 178 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 RAD51BO15315 384 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 SPINT1O43278 529 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 MAFKO60675 156 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 PIAS2O75928 621 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 APOC2P02655 101 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 ADRB3P13945 408 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 ITGB7P26010 798 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 DEKP35659 375 aaKnown RBP12.58□□□□□ -0.4
ACTN1-206ENST00000544964 EIF2S3P41091 472 aaKnown RBP12.58□□□□□ -0.4
ACTN1-206ENST00000544964 ABCG1P45844 678 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 NEK3P51956 506 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 SEMG2Q02383 582 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 IL10RBQ08334 325 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 KYAT3Q6YP21 454 aaKnown RBP12.58□□□□□ -0.4
ACTN1-206ENST00000544964 NYAP1Q6ZVC0 841 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 PARS2Q7L3T8 475 aaKnown RBP12.58□□□□□ -0.4
ACTN1-206ENST00000544964 SLC13A5Q86YT5 568 aaPredicted RBP12.58□□□□□ -0.4
ACTN1-206ENST00000544964 CACTIN-AS1Q8N1I8 211 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 PCDH20Q8N6Y1 951 aaKnown RBP12.58□□□□□ -0.4
ACTN1-206ENST00000544964 SNIP1Q8TAD8 396 aaKnown RBP12.58□□□□□ -0.4
ACTN1-206ENST00000544964 ACTL9Q8TC94 416 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 COG1Q8WTW3 980 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 MS4A14Q96JA4 679 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 C16orf45Q96MC5 204 aaPredicted RBP12.58□□□□□ -0.4
ACTN1-206ENST00000544964 OLFM3Q96PB7 478 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 OSBPL9Q96SU4 736 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 LGMNQ99538 433 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 C10orf88Q9H8K7 445 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 DYRK4Q9NR20 520 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 UBA2Q9UBT2 640 aaPredicted RBP12.58□□□□□ -0.4
ACTN1-206ENST00000544964 SNX12Q9UMY4 172 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 U3KQA8 63 aa12.58□□□□□ -0.4
ACTN1-206ENST00000544964 LRP4O75096 1905 aa12.57□□□□□ -0.4
ACTN1-206ENST00000544964 CTAGE9A4FU28 777 aa12.57□□□□□ -0.4
ACTN1-206ENST00000544964 POM121BA6NF01 834 aa12.57□□□□□ -0.4
ACTN1-206ENST00000544964 ZSCAN5CA6NGD5 496 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-206ENST00000544964 A6NNZ2 444 aa12.57□□□□□ -0.4
ACTN1-206ENST00000544964 ZNF185O15231 689 aa12.57□□□□□ -0.4
ACTN1-206ENST00000544964 FFAR2O15552 330 aa12.57□□□□□ -0.4
ACTN1-206ENST00000544964 BRINP1O60477 761 aa12.57□□□□□ -0.4
ACTN1-206ENST00000544964 TMCC1O94876 653 aa12.57□□□□□ -0.4
ACTN1-206ENST00000544964 PCDH8O95206 1070 aa12.57□□□□□ -0.4
ACTN1-206ENST00000544964 PEX11BO96011 259 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms