RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SLC2A13Q96QE2 648 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 RAB6CQ9H0N0 254 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 AGO3Q9H9G7 860 aaKnown RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 PLGRKTQ9HBL7 147 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 ACSS2Q9NR19 701 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 COMMD8Q9NX08 183 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 CLIC5Q9NZA1 410 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 SIRPGQ9P1W8 387 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 DNAJB4Q9UDY4 337 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 PSMD13Q9UNM6 376 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 WASF2Q9Y6W5 498 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 ZBTB42B2RXF5 422 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 TPST1O60507 370 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 RPP40O75818 363 aaKnown RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 TYMPP19971 482 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 ITGAXP20702 1163 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 FGFR3P22607 806 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 SLC1A2P43004 574 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 GJA8P48165 433 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 NIPAL4Q0D2K0 466 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 SLC10A2Q12908 348 aaPredicted RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 ZNF460Q14592 562 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 CWF19L1Q69YN2 538 aaKnown RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 MICU2Q8IYU8 434 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 MAB21L3Q8N8X9 362 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 FNDC5Q8NAU1 212 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 OSCP1Q8WVF1 389 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 HMCESQ96FZ2 354 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 RMND5BQ96G75 393 aaPredicted RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 KLHL5Q96PQ7 755 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 FCRL5Q96RD9 977 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 HAPLN3Q96S86 360 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 SEMA3CQ99985 751 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 SLC39A8Q9C0K1 460 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 SLC25A51Q9H1U9 297 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 RNF39Q9H2S5 420 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 VPS45Q9NRW7 570 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 GMIPQ9P107 970 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 SLC25A13Q9UJS0 675 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 MYRFQ9Y2G1 1151 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 VWA7Q9Y334 891 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 Q9Y3F1 56 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 DNAJC25-GNG10A0A024R161 153 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 PRR23D1E9PI22 279 aaPredicted RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 BCL10O95999 233 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 PRR23D2P0DMB1 279 aaPredicted RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 AOC1P19801 751 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 HLA-DPA1P20036 260 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 SP100P23497 879 aaPredicted RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 DNAJB1P25685 340 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 BNIP2Q12982 314 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 PLD1Q13393 1074 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 ARMCX4Q5H9R4 360 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 EPGNQ6UW88 154 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 ZNF554Q86TJ5 538 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 GPSM1Q86YR5 675 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 STK40Q8N2I9 435 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 CNTD1Q8N815 330 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 BRI3BPQ8WY22 251 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 RSPH1Q8WYR4 309 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 HDAC10Q969S8 669 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 BTN2A3PQ96KV6 586 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 NPY6RQ99463 290 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 C9orf16Q9BUW7 83 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 OSBPL2Q9H1P3 480 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 MRM3Q9HC36 420 aaKnown RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 RAB26Q9ULW5 256 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 SSC5DA1L4H1 1573 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 DPPA5A6NC42 116 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 TK2O00142 265 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 LZTS3O60299 673 aaPredicted RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 CCNT2O60583 730 aaKnown RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 DUSP11O75319 330 aaKnown RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 MLYCDO95822 493 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 ALDH1A1P00352 501 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 F2P00734 622 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 PFKMP08237 780 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 FGF3P11487 239 aaPredicted RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 EPHB3P54753 998 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 INHBEP58166 350 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 GALNT2Q10471 571 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 ARL13AQ5H913 290 aaPredicted RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 TMEM63BQ5T3F8 832 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 PQLC1Q8N2U9 271 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 PANX3Q96QZ0 392 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 C1orf50Q9BV19 199 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 PAIP1Q9H074 479 aaKnown RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 UXTQ9UBK9 157 aaPredicted RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 SLC13A4Q9UKG4 626 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 PADI3Q9ULW8 664 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 OR6C75A6NL08 312 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 MYO1GB0I1T2 1018 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 CFAP99D6REC4 459 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 MT-CYBP00156 380 aaPredicted RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 OR4Q2P0C623 313 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 ADSLP30566 484 aaPredicted RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 ATP5C1P36542 298 aaKnown RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 ACTR3P61158 418 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 HERC3Q15034 1050 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 TSTD2Q5T7W7 516 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms