RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 MIA3Q5JRA6 1907 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 FRMPD3Q5JV73 1810 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 LDB2O43679 373 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 PRAMEF11O60813 436 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 ITGB1P05556 798 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 ATXN1LP0C7T5 689 aaKnown RBP12.51□□□□□ -0.41
PAAF1-215ENST00000544909 CCDC166P0CW27 439 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 YWHAQP27348 245 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 CD86P42081 329 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 ELAVL2Q12926 359 aaKnown RBP12.51□□□□□ -0.41
PAAF1-215ENST00000544909 GRIK2Q13002 908 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 CEACAM7Q14002 265 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 TRIM25Q14258 630 aaKnown RBP12.51□□□□□ -0.41
PAAF1-215ENST00000544909 TYSND1Q2T9J0 566 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 PAN2Q504Q3 1202 aaKnown RBP12.51□□□□□ -0.41
PAAF1-215ENST00000544909 SFT2D3Q587I9 215 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 RGMBQ6NW40 437 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 PRMT9Q6P2P2 845 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 ALDH16A1Q8IZ83 802 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 AGR3Q8TD06 166 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 TRIB2Q92519 343 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 CATSPER2Q96P56 530 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 OLFM1Q99784 485 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 SHCBP1LQ9BZQ2 653 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 TFB2MQ9H5Q4 396 aaKnown RBP12.51□□□□□ -0.41
PAAF1-215ENST00000544909 ELAC1Q9H777 363 aaKnown RBP12.51□□□□□ -0.41
PAAF1-215ENST00000544909 ABI2Q9NYB9 513 aaPredicted RBP12.51□□□□□ -0.41
PAAF1-215ENST00000544909 GTSE1Q9NYZ3 720 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 INPP5FQ9Y2H2 1132 aa12.51□□□□□ -0.41
PAAF1-215ENST00000544909 MYLKQ15746 1914 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 PSMD12O00232 456 aaPredicted RBP12.5□□□□□ -0.41
PAAF1-215ENST00000544909 CA12O43570 354 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 RNASEH1O60930 286 aaKnown RBP12.5□□□□□ -0.41
PAAF1-215ENST00000544909 MOCS2O96007 188 aaPredicted RBP12.5□□□□□ -0.41
PAAF1-215ENST00000544909 ZDHHC11BP0C7U3 371 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 CHRNA4P43681 627 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 AQP4P55087 323 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 SLC10A7Q0GE19 358 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 POLD3Q15054 466 aaPredicted RBP12.5□□□□□ -0.41
PAAF1-215ENST00000544909 USP41Q3LFD5 358 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 LIN52Q52LA3 116 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 SAMD4BQ5PRF9 694 aaKnown RBP12.5□□□□□ -0.41
PAAF1-215ENST00000544909 RBM20Q5T481 1227 aaKnown RBP12.5□□□□□ -0.41
PAAF1-215ENST00000544909 C8orf82Q6P1X6 216 aaPredicted RBP12.5□□□□□ -0.41
PAAF1-215ENST00000544909 EFL1Q7Z2Z2 1120 aaKnown RBP12.5□□□□□ -0.41
PAAF1-215ENST00000544909 RAB44Q7Z6P3 723 aaPredicted RBP12.5□□□□□ -0.41
PAAF1-215ENST00000544909 ISCA2Q86U28 154 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 SCN4BQ8IWT1 228 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 CLYBLQ8N0X4 340 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 PCYOX1LQ8NBM8 494 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 TUBGCP5Q96RT8 1024 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 CCT7Q99832 543 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 EFHD1Q9BUP0 239 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 YIPF3Q9GZM5 350 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 MAGEH1Q9H213 219 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 GSTO2Q9H4Y5 243 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 SYTL2Q9HCH5 934 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 PFDN4Q9NQP4 134 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 PAPOLBQ9NRJ5 636 aaKnown RBP12.5□□□□□ -0.41
PAAF1-215ENST00000544909 CACNA2D2Q9NY47 1150 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 UXTQ9UBK9 157 aaPredicted RBP12.5□□□□□ -0.41
PAAF1-215ENST00000544909 PADI4Q9UM07 663 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 NOD1Q9Y239 953 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 TRAF6Q9Y4K3 522 aa12.5□□□□□ -0.41
PAAF1-215ENST00000544909 TRIM24O15164 1050 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 GPC4O75487 556 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 SKAP2O75563 359 aaPredicted RBP12.49□□□□□ -0.41
PAAF1-215ENST00000544909 RPP40O75818 363 aaKnown RBP12.49□□□□□ -0.41
PAAF1-215ENST00000544909 ZMPSTE24O75844 475 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 GLP2RO95838 553 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 SNRPB2P08579 225 aaKnown RBP12.49□□□□□ -0.41
PAAF1-215ENST00000544909 HSPA8P11142 646 aaKnown RBP12.49□□□□□ -0.41
PAAF1-215ENST00000544909 XRCC1P18887 633 aaPredicted RBP12.49□□□□□ -0.41
PAAF1-215ENST00000544909 YY1P25490 414 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 STX1BP61266 288 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 RHDQ02161 417 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 FOXM1Q08050 763 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 LRP8Q14114 963 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 FASTKQ14296 549 aaKnown RBP12.49□□□□□ -0.41
PAAF1-215ENST00000544909 ZNF460Q14592 562 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 PDK3Q15120 406 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 ADRM1Q16186 407 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 KCNA10Q16322 511 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 GPR162Q16538 588 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 GRAMD1BQ3KR37 738 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 SIRPB2Q5JXA9 342 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 PPM1LQ5SGD2 360 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 ZNF678Q5SXM1 525 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 FBXL22Q6P050 247 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 AHI1Q8N157 1196 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 HASPINQ8TF76 798 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 OVCA2Q8WZ82 227 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 PABPC5Q96DU9 382 aaKnown RBP12.49□□□□□ -0.41
PAAF1-215ENST00000544909 ZFRQ96KR1 1074 aaKnown RBP12.49□□□□□ -0.41
PAAF1-215ENST00000544909 UHRF1Q96T88 793 aaPredicted RBP12.49□□□□□ -0.41
PAAF1-215ENST00000544909 C19orf43Q9BQ61 176 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 C1QTNF3Q9BXJ4 246 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 SEZ6LQ9BYH1 1024 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 MUC13Q9H3R2 512 aa12.49□□□□□ -0.41
PAAF1-215ENST00000544909 C8orf4Q9NR00 106 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms