RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, human

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAMP1-208	ENST00000544432	JUND	P17535	347 aa		13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	MAGEA1	P43355	309 aa		13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	E2F1	Q01094	437 aa		13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	SLC10A2	Q12908	348 aa	Predicted RBP	13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	ZNF542P	Q5EBM4	170 aa		13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	ZFYVE27	Q5T4F4	411 aa		13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	DHRS13	Q6UX07	377 aa		13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	CBARP	Q8N350	705 aa	Predicted RBP	13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	ATL2	Q8NHH9	583 aa		13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	HDAC11	Q96DB2	347 aa		13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	APOO	Q9BUR5	198 aa		13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	POLR1E	Q9GZS1	481 aa	Known RBP	13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	RBSN	Q9H1K0	784 aa		13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	EVA1B	Q9NVM1	165 aa		13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	DTL	Q9NZJ0	730 aa		13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	SPAST	Q9UBP0	616 aa		13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	COQ6	Q9Y2Z9	468 aa		13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	FREM2	Q5SZK8	3169 aa		13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	GOLGA4	Q13439	2230 aa	Known RBP	13.98	□□□□□ -0.17
VAMP1-208	ENST00000544432	ZZEF1	O43149	2961 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	TTC24	A2A3L6	582 aa	Predicted RBP	13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	LRRD1	A4D1F6	860 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432		K7ESM1	405 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	AQP9	O43315	295 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	RECQL5	O94762	991 aa	Predicted RBP	13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	PGLS	O95336	258 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	CP	P00450	1065 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	PRKCG	P05129	697 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	CCNB1	P14635	433 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	ZFX	P17010	805 aa	Predicted RBP	13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	FECH	P22830	423 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	VIPR1	P32241	457 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	TRIM23	P36406	574 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	BLK	P51451	505 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	DUSP3	P51452	185 aa	Predicted RBP	13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	ZNF75D	P51815	510 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	MAX	P61244	160 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	GBE1	Q04446	702 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	TRAF2	Q12933	501 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	INPP5A	Q14642	412 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	NFATC4	Q14934	902 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	ARMC12	Q5T9G4	340 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	SLC9A4	Q6AI14	798 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	RHOT1	Q8IXI2	618 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	SDR16C5	Q8N3Y7	309 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	PAF1	Q8N7H5	531 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	SCRN2	Q96FV2	425 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	COQ10A	Q96MF6	247 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	PANX2	Q96RD6	677 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	NT5M	Q9NPB1	228 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	DDX56	Q9NY93	547 aa	Known RBP	13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	NCKIPSD	Q9NZQ3	722 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	B4GALT6	Q9UBX8	382 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	SALL4	Q9UJQ4	1053 aa		13.97	□□□□□ -0.17
VAMP1-208	ENST00000544432	PTPRB	P23467	1997 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	PLXNB3	Q9ULL4	1909 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432		A0A0A6YYK5	440 aa	Predicted RBP	13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	LMO7DN	F2Z398	122 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	PSMD11	O00231	422 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	FFAR2	O15552	330 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	FZD6	O60353	706 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	HEXIM1	O94992	359 aa	Known RBP	13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	GP1BA	P07359	652 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	CYP2A6	P11509	494 aa	Predicted RBP	13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	KRT10	P13645	584 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	GM2A	P17900	193 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	COMT	P21964	271 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	HTR1B	P28222	390 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	CYLC1	P35663	651 aa	Predicted RBP	13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	SEMG2	Q02383	582 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	PPARD	Q03181	441 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	PPID	Q08752	370 aa	Known RBP	13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	CAMK2B	Q13554	666 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	CCDC157	Q569K6	752 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	KDM7A	Q6ZMT4	941 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	CCDC13	Q8IYE1	715 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	PHACTR4	Q8IZ21	702 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	NDUFAF2	Q8N183	169 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	PLD5	Q8N7P1	536 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	TPCN2	Q8NHX9	752 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	PIH1D2	Q8WWB5	315 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	CALR3	Q96L12	384 aa	Known RBP	13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	APOLD1	Q96LR9	279 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	ZNF830	Q96NB3	372 aa	Predicted RBP	13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	SEMA3C	Q99985	751 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	MAK16	Q9BXY0	300 aa	Known RBP	13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	SLC13A1	Q9BZW2	595 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	BRD8	Q9H0E9	1235 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	LUC7L	Q9NQ29	371 aa	Known RBP	13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	DKK4	Q9UBT3	224 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	APOBEC3B	Q9UH17	382 aa	Known RBP	13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	PCDHA13	Q9Y5I0	950 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	RAI2	Q9Y5P3	530 aa		13.96	□□□□□ -0.17
VAMP1-208	ENST00000544432	TDRD6	O60522	2096 aa	Known RBP	13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	LY6G6E	A0A0G2JKS1	128 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms