RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 TRHDEQ9UKU6 1024 aa19.22■□□□□ 0.67
DDX55-211ENST00000544429 PYCARDQ9ULZ3 195 aa19.22■□□□□ 0.67
DDX55-211ENST00000544429 ANKRD6Q9Y2G4 727 aa19.22■□□□□ 0.67
DDX55-211ENST00000544429 JRKLQ9Y4A0 524 aa19.22■□□□□ 0.67
DDX55-211ENST00000544429 HS3ST3A1Q9Y663 406 aa19.22■□□□□ 0.67
DDX55-211ENST00000544429 A0A0J9YYE9 177 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 GOLGA6L9A6NEM1 432 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 USP27XA6NNY8 438 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 H7C0C1 242 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 KCNK3O14649 394 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 TM4SF5O14894 197 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 ZNF189O75820 626 aaPredicted RBP19.21■□□□□ 0.67
DDX55-211ENST00000544429 TM7SF2O76062 418 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 TRBC1P01850 177 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 C6P13671 934 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 ATP5OP48047 213 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 LIG3P49916 1009 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 SIX1Q15475 284 aaPredicted RBP19.21■□□□□ 0.67
DDX55-211ENST00000544429 KIF19Q2TAC6 998 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 SEL1L2Q5TEA6 688 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 CDKL3Q8IVW4 592 aaPredicted RBP19.21■□□□□ 0.67
DDX55-211ENST00000544429 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.21■□□□□ 0.67
DDX55-211ENST00000544429 CXorf40AQ8TE69 158 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 PDCD6IPQ8WUM4 868 aaKnown RBP19.21■□□□□ 0.67
DDX55-211ENST00000544429 BMFQ96LC9 184 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 LYSMD1Q96S90 227 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 RBM15Q96T37 977 aaKnown RBP eCLIP19.21■□□□□ 0.67
DDX55-211ENST00000544429 PCDH9Q9HC56 1237 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 FZD3Q9NPG1 666 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 DNAAF2Q9NVR5 837 aaKnown RBP19.21■□□□□ 0.67
DDX55-211ENST00000544429 B4GALT6Q9UBX8 382 aa19.21■□□□□ 0.67
DDX55-211ENST00000544429 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.2■□□□□ 0.66
DDX55-211ENST00000544429 NPIPB15A6NHN6 443 aaPredicted RBP19.2■□□□□ 0.66
DDX55-211ENST00000544429 LHCGRP22888 699 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 AKT2P31751 481 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 FAM193AP78312 1265 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 SEMG2Q02383 582 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 PTPRRQ15256 657 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 STPG1Q5TH74 334 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 KLHDC8BQ8IXV7 354 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 TP53I13Q8NBR0 393 aaPredicted RBP19.2■□□□□ 0.66
DDX55-211ENST00000544429 SPATA22Q8NHS9 363 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 FAM174AQ8TBP5 190 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 FCRL5Q96RD9 977 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 GORASP1Q9BQQ3 440 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 TMEM9BQ9NQ34 198 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 AASDHPPTQ9NRN7 309 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 TRMT1Q9NXH9 659 aaKnown RBP19.2■□□□□ 0.66
DDX55-211ENST00000544429 DLL3Q9NYJ7 618 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 CHKBQ9Y259 395 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 CA5BQ9Y2D0 317 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 SNX11Q9Y5W9 270 aa19.2■□□□□ 0.66
DDX55-211ENST00000544429 POM121BA6NF01 834 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 H0Y8X5 98 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 TLR4O00206 839 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 SLC30A4O14863 429 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 HEXIM1O94992 359 aaKnown RBP19.19■□□□□ 0.66
DDX55-211ENST00000544429 MT-CYBP00156 380 aaPredicted RBP19.19■□□□□ 0.66
DDX55-211ENST00000544429 NFKB1P19838 968 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 CA4P22748 312 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 VIPR1P32241 457 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 NXPH1P58417 271 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 SGCGQ13326 291 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 STAT4Q14765 748 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 OASLQ15646 514 aaKnown RBP19.19■□□□□ 0.66
DDX55-211ENST00000544429 CNGA3Q16281 694 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 CDKN3Q16667 212 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 ZNF423Q2M1K9 1284 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 KDELC1Q6UW63 502 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 IL27RAQ6UWB1 636 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 KYAT3Q6YP21 454 aaKnown RBP19.19■□□□□ 0.66
DDX55-211ENST00000544429 USP45Q70EL2 814 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 SPATS2Q86XZ4 545 aaKnown RBP19.19■□□□□ 0.66
DDX55-211ENST00000544429 MINDY1Q8N5J2 469 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 OXNAD1Q96HP4 312 aaPredicted RBP19.19■□□□□ 0.66
DDX55-211ENST00000544429 COQ10AQ96MF6 247 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 FRMD8P1Q9BZ68 369 aaPredicted RBP19.19■□□□□ 0.66
DDX55-211ENST00000544429 GBA3Q9H227 469 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 ERVMER34-1Q9H9K5 563 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 KCND1Q9NSA2 647 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 KLHL8Q9P2G9 620 aaPredicted RBP19.19■□□□□ 0.66
DDX55-211ENST00000544429 DNPEPQ9ULA0 475 aa19.19■□□□□ 0.66
DDX55-211ENST00000544429 C5orf60A6NFR6 353 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 CAPN8A6NHC0 703 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 ANKRD66B4E2M5 251 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 PSMD11O00231 422 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 ALPIP09923 528 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 ZNF883P0CG24 379 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 NFKBIAP25963 317 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 HNF1BP35680 557 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 IGFALSP35858 605 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 CLDN2P57739 230 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 PFN3P60673 137 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 QPCTQ16769 361 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 WSCD2Q2TBF2 565 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 HLA-BQ31612 363 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 ANKRD20A2Q5SQ80 823 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 ANKRD20A1Q5TYW2 823 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 ANKRD20A3Q5VUR7 823 aa19.18■□□□□ 0.66
DDX55-211ENST00000544429 DARS2Q6PI48 645 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms