RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 NXNL1Q96CM4 212 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 PRRG3Q9BZD7 231 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 GIN1Q9NXP7 522 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 PCDHGC3Q9UN70 934 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 SPATA31C2B4DYI2 1134 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 CLDN25C9JDP6 229 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 SLC22A3O75751 556 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 EPN2O95208 641 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 NR4A1P22736 598 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 KLRC2P26717 231 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 SEC14L1Q92503 715 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 MYDGFQ969H8 173 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 SERPINB11Q96P15 392 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 B3GNT5Q9BYG0 378 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 SERHL2Q9H4I8 314 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 SERHLQ9NQF3 203 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 IPO13O94829 963 aaKnown RBP19.43■□□□□ 0.7
SUDS3-204ENST00000543473 RPLP2P05387 115 aaKnown RBP19.43■□□□□ 0.7
SUDS3-204ENST00000543473 CD86P42081 329 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 PHKG1Q16816 387 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 C11orf96Q7Z7L8 435 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 TBC1D19Q8N5T2 526 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 TMEM169Q96HH4 297 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 COLEC11Q9BWP8 271 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.43■□□□□ 0.7
SUDS3-204ENST00000543473 CNPP09543 421 aaKnown RBP19.43■□□□□ 0.7
SUDS3-204ENST00000543473 PTPN1P18031 435 aaKnown RBP19.43■□□□□ 0.7
SUDS3-204ENST00000543473 SLC26A3P40879 764 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 RAB15P59190 212 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 DLG2Q15700 870 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 ZNF549Q6P9A3 640 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 ZYG11AQ6WRX3 759 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 FANCEQ9HB96 536 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 IKZF3Q9UKT9 509 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 NFASCO94856 1347 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 RECQL4O94761 1208 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 MT-ND1P03886 318 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 MAGEA10P43363 369 aaPredicted RBP19.43■□□□□ 0.7
SUDS3-204ENST00000543473 SPRED3Q2MJR0 410 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 FSTL4Q6MZW2 842 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 BTN2A2Q8WVV5 523 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 REXO5Q96IC2 774 aaKnown RBP19.43■□□□□ 0.7
SUDS3-204ENST00000543473 PHF12Q96QT6 1004 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 CHRAC1Q9NRG0 131 aa19.43■□□□□ 0.7
SUDS3-204ENST00000543473 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.43■□□□□ 0.7
SUDS3-204ENST00000543473 TK2O00142 265 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 UGT1A9O60656 530 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 CCNE2O96020 404 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 MYL12AP19105 171 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 GJA8P48165 433 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 GRM3Q14832 879 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 PSMD5Q16401 504 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 FGD3Q5JSP0 725 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 C7orf43Q8WVR3 580 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 POLR1EQ9GZS1 481 aaKnown RBP19.42■□□□□ 0.7
SUDS3-204ENST00000543473 UGT1A7Q9HAW7 530 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 UGT1A10Q9HAW8 530 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 UGT1A8Q9HAW9 530 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 ECHS1P30084 290 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 ANGPT1Q15389 498 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 VPS26BQ4G0F5 336 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 GLYATQ6IB77 296 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 MFSD3Q96ES6 412 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 CYP2C18P33260 490 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 RPS7P62081 194 aaKnown RBP19.42■□□□□ 0.7
SUDS3-204ENST00000543473 COX10Q12887 443 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 GPRIN3Q6ZVF9 776 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 MTMR14Q8NCE2 650 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 C19orf60Q96EN9 201 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 FAXDC2Q96IV6 333 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 ZNF395Q9H8N7 513 aaPredicted RBP19.42■□□□□ 0.7
SUDS3-204ENST00000543473 ZFP14Q9HCL3 533 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 TTLL13PA6NNM8 815 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 H3BSA7 217 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 FGF10O15520 208 aaPredicted RBP19.42■□□□□ 0.7
SUDS3-204ENST00000543473 B4GALT5O43286 388 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 POMCP01189 267 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 SEPHS1P49903 392 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 INHBEP58166 350 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 REP15Q6BDI9 236 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 KCTD8Q6ZWB6 473 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 GPR142Q7Z601 462 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 ZNF410Q86VK4 478 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 CPSF7Q8N684 471 aaKnown RBP19.42■□□□□ 0.7
SUDS3-204ENST00000543473 GLIS1Q8NBF1 620 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 PPP3R2Q96LZ3 170 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 ARHGAP28Q9P2N2 729 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 RPS6KA6Q9UK32 745 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 PADI4Q9UM07 663 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 U3KQV3 271 aa19.42■□□□□ 0.7
SUDS3-204ENST00000543473 GLTPD2A6NH11 291 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 TSPAN19P0C672 248 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 CCT3P49368 545 aaKnown RBP19.41■□□□□ 0.7
SUDS3-204ENST00000543473 CARTPTQ16568 116 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 OVOS1Q6IE37 1185 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 KIAA0319LQ8IZA0 1049 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 VPS28Q9UK41 221 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 H0YC42 278 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 KLF11O14901 512 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 GCATO75600 419 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms