RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 NRF1Q16656 503 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 MYLK3Q32MK0 819 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 SLC22A9Q8IVM8 553 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 ZFP28Q8NHY6 868 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 TSPAN17Q96FV3 270 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 ZNF597Q96LX8 424 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 SENP6Q9GZR1 1112 aaPredicted RBP16.67■□□□□ 0.26
KDM2B-216ENST00000543025 UPF3AQ9H1J1 476 aaKnown RBP16.67■□□□□ 0.26
KDM2B-216ENST00000543025 TNFRSF12AQ9NP84 129 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 MIOSQ9NXC5 875 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 PRORSD1PA6NEY8 169 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 CASTOR2A6NHX0 329 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 ASLP04424 464 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 SNRPB2P08579 225 aaKnown RBP16.67■□□□□ 0.26
KDM2B-216ENST00000543025 CCR1P32246 355 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 LBX1P52954 281 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 NR1H2P55055 460 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 ADRM1Q16186 407 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 FSCN1Q16658 493 aaKnown RBP16.67■□□□□ 0.26
KDM2B-216ENST00000543025 PPP1R3AQ16821 1122 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 TIGD5Q53EQ6 642 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 ZNF789Q5FWF6 425 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 CHERPQ8IWX8 916 aaKnown RBP16.67■□□□□ 0.26
KDM2B-216ENST00000543025 PHF21BQ96EK2 531 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 FCRL2Q96LA5 508 aaPredicted RBP16.67■□□□□ 0.26
KDM2B-216ENST00000543025 RTP3Q9BQQ7 232 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 ACBD6Q9BR61 282 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 SLC25A23Q9BV35 468 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 SEMA6AQ9H2E6 1030 aa16.67■□□□□ 0.26
KDM2B-216ENST00000543025 BRCA2P51587 3418 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 MYOCOSA0A1B0GUC4 107 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 ARHGAP10A1A4S6 786 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 ODC1P11926 461 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 PLK1P53350 603 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 PCSK7Q16549 785 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 FAM171BQ6P995 826 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 RPS27LQ71UM5 84 aaKnown RBP16.66■□□□□ 0.26
KDM2B-216ENST00000543025 LRTOMTQ8WZ04 291 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 LPGAT1Q92604 370 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 KATNAL1Q9BW62 490 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 COQ10BQ9H8M1 238 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 ABCC13Q9NSE7 274 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 ARSAP15289 507 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 WNT3AP56704 352 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 RALGDSQ12967 914 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 SLC14A2Q15849 920 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 FAM45BPQ6NSW5 357 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 BORAQ6PGQ7 559 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 PTAR1Q7Z6K3 402 aaPredicted RBP16.66■□□□□ 0.26
KDM2B-216ENST00000543025 FAM45AQ8TCE6 357 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 LPPQ93052 612 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 DUS3LQ96G46 650 aaKnown RBP16.66■□□□□ 0.26
KDM2B-216ENST00000543025 UBXN10Q96LJ8 280 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 PAAF1Q9BRP4 392 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 OSBPL11Q9BXB4 747 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 ATXN10Q9UBB4 475 aa16.66■□□□□ 0.26
KDM2B-216ENST00000543025 TCRBV3S1A0A5B6 114 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 C7orf72A4D263 438 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 ARL5CA6NH57 179 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 PDLIM1O00151 329 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 MRASO14807 208 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 ADAMTS4O75173 837 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 CSPG5O95196 566 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 HDCP19113 662 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 SLC7A1P30825 629 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 RPL9P32969 192 aaKnown RBP16.65■□□□□ 0.26
KDM2B-216ENST00000543025 SCNN1GP51170 649 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 TXNL4AP83876 142 aaKnown RBP16.65■□□□□ 0.26
KDM2B-216ENST00000543025 IKBKEQ14164 716 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 UPP1Q16831 310 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 TMEM259Q4ZIN3 620 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 SAMD4BQ5PRF9 694 aaKnown RBP16.65■□□□□ 0.26
KDM2B-216ENST00000543025 LRRC49Q8IUZ0 686 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 HERC6Q8IVU3 1022 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 ALDH16A1Q8IZ83 802 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 SCAMP5Q8TAC9 235 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 TRMOQ9BU70 441 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 ARNT2Q9HBZ2 717 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 HMX1Q9NP08 348 aaPredicted RBP16.65■□□□□ 0.26
KDM2B-216ENST00000543025 CD300AQ9UGN4 299 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 CROTQ9UKG9 612 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 TRAF6Q9Y4K3 522 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 NRP2O60462 931 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 SRP72O76094 671 aaKnown RBP16.65■□□□□ 0.26
KDM2B-216ENST00000543025 NOMO2Q5JPE7 1267 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 HECTD2Q5U5R9 776 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 RTL3Q8N8U3 475 aaKnown RBP16.65■□□□□ 0.26
KDM2B-216ENST00000543025 PBXIP1Q96AQ6 731 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 RANBP9Q96S59 729 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 EFHD1Q9BUP0 239 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 SMOC2Q9H3U7 446 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 GSTO2Q9H4Y5 243 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 TMEM181Q9P2C4 612 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 SFMBT1Q9UHJ3 866 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 SNX13Q9Y5W8 968 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 AK5Q9Y6K8 562 aa16.65■□□□□ 0.26
KDM2B-216ENST00000543025 ARHGEF37A1IGU5 675 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 MSI1O43347 362 aaKnown RBP16.64■□□□□ 0.25
KDM2B-216ENST00000543025 IMPDH1P20839 514 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 SERPINH1P50454 418 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms