RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 EXD3Q8N9H8 876 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 TC2NQ8N9U0 490 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 CPEB3Q8NE35 698 aaKnown RBP4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 ABHD11Q8NFV4 315 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 KRT35Q92764 455 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 MR1Q95460 341 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 EXOC4Q96A65 974 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 PTERQ96BW5 349 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 PTCD3Q96EY7 689 aaKnown RBP4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 PGBD1Q96JS3 809 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 CABS1Q96KC9 395 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 ADAD1Q96M93 576 aaKnown RBP4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 BBS4Q96RK4 519 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 IFT27Q9BW83 186 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 C1QTNF1Q9BXJ1 281 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 NUF2Q9BZD4 464 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 ZNF768Q9H5H4 540 aaKnown RBP4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 CXorf56Q9H5V9 222 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 KLC4Q9NSK0 619 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 ASNSD1Q9NWL6 643 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 DDX43Q9NXZ2 648 aaKnown RBP4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 ICKQ9UPZ9 632 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 DTX4Q9Y2E6 619 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 KLHL20Q9Y2M5 609 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 RAPGEF6Q8TEU7 1601 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 KDM5CP41229 1560 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 NUP153P49790 1475 aaKnown RBP4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 TCRBV7S3A2A0A539 114 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 A4D1N5 150 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 CCDC151A5D8V7 595 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 VWC2LB2RUY7 222 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 NPIPB11E5RHQ5 1161 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 INO80B-WBP1J3KQ70 363 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 PRPF4O43172 522 aaKnown RBP eCLIP4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 FOXS1O43638 330 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 LPXNO60711 386 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 TADA2AO75478 443 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 IL1AP01583 271 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 CHRM2P08172 466 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 FAM200BP0CF97 657 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 ZFXP17010 805 aaPredicted RBP4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 ENGP17813 658 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 TACR2P21452 398 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 FPR3P25089 353 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 GDF5P43026 501 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 AMPHP49418 695 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 ARSFP54793 590 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 RHAGQ02094 409 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 ZBTB16Q05516 673 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 DMWDQ09019 674 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 C17orf67Q0P5P2 114 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 PTK6Q13882 451 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 NAB2Q15742 525 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 ME3Q16798 604 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 HYAL4Q2M3T9 481 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 SMU1Q2TAY7 513 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 BEAN1Q3B7T3 259 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 C2orf76Q3KRA6 126 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 TBC1D25Q3MII6 688 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 C5orf22Q49AR2 442 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 PARP10Q53GL7 1025 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 PMS2CLQ68D20 193 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 ISM2Q6H9L7 571 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 RAB12Q6IQ22 244 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 VWA1Q6PCB0 445 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 CPLX2Q6PUV4 134 aaKnown RBP4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 OTOAQ7RTW8 1153 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 AACSQ86V21 672 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 KLBQ86Z14 1044 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 DHX40Q8IX18 779 aaKnown RBP4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 ZNF619Q8N2I2 560 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 DPP10Q8N608 796 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 TEX9Q8N6V9 391 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 PI4KAP1Q8N8J0 262 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 FIBINQ8TAL6 211 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 KCNE4Q8WWG9 221 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 LRRC59Q96AG4 307 aaKnown RBP4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 PBKQ96KB5 322 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 AGAP2Q99490 1192 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 SYT17Q9BSW7 474 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 SLC25A23Q9BV35 468 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 PLEKHA4Q9H4M7 779 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 TBCCD1Q9NVR7 557 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 UBA2Q9UBT2 640 aaPredicted RBP4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 FBXO40Q9UH90 709 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 ST6GALNAC2Q9UJ37 374 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 MOSPD1Q9UJG1 213 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 FAM96BQ9Y3D0 163 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 TSC22D4Q9Y3Q8 395 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 CMAHPQ9Y471 501 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 SYNMO15061 1565 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 PLCH2O75038 1416 aa4.04□□□□□ -1.76
SFSWAP-211ENST00000542813 CTTNBP2Q8WZ74 1663 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 VWDEQ8N2E2 1590 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 GPR75-ASB3A0A0A6YYF3 556 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 FAM237AA0A1B0GTK4 181 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 WDR27A2RRH5 827 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms