RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 ATP13A1Q9HD20 1204 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 FAM105AQ9NUU6 356 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 ST3GAL5Q9UNP4 418 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 TRPV2Q9Y5S1 764 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 STX16-NPEPL1H3BU86 382 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 MATN2O00339 956 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 HS6ST1O60243 411 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 KPNA6O60684 536 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 SEC22BO75396 215 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 KRT6AP02538 564 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 KRT6BP04259 564 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 F7P08709 466 aaPredicted RBP8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 ITGB6P18564 788 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 MSH3P20585 1137 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 ITGALP20701 1170 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 KRT6CP48668 564 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 MTTPP55157 894 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 OLIG2Q13516 323 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 CDH18Q13634 790 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 RAP1GAP2Q684P5 730 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 TTC23LQ6PF05 361 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 ADGRG6Q86SQ4 1221 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 LDB1Q86U70 411 aaPredicted RBP8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 HS6ST3Q8IZP7 471 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 C8orf59Q8N0T1 100 aaPredicted RBP8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 LGI2Q8N0V4 545 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 PLD6Q8N2A8 252 aaKnown RBP8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 CBR4Q8N4T8 237 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 CDYL2Q8N8U2 506 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 RORBQ92753 470 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 DACT3Q96B18 629 aaPredicted RBP8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 ADAM2Q99965 735 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 C1orf50Q9BV19 199 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 NFKBIZQ9BYH8 718 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 ELOVL6Q9H5J4 265 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 NMRK2Q9NPI5 230 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 DDX28Q9NUL7 540 aaKnown RBP8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 ZDHHC2Q9UIJ5 367 aa8.24□□□□□ -1.09
PRKAB1-207ENST00000542698 ZNF487B1APH4 448 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 CFAP99D6REC4 459 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 MATN3O15232 486 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 CD3EAPO15446 510 aaKnown RBP8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 PARNO95453 639 aaKnown RBP8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 H6PDO95479 791 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 IL1BP01584 269 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 PCNAP12004 261 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 ZNF7P17097 686 aaPredicted RBP8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 GALK1P51570 392 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 SLC10A2Q12908 348 aaPredicted RBP8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 MAD2L1Q13257 205 aaPredicted RBP8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 ITGADQ13349 1161 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 ACAP2Q15057 778 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 RAB6CQ53S08 254 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 ZNF280DQ6N043 979 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 ZC3HC1Q86WB0 502 aaKnown RBP8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 TBC1D21Q8IYX1 336 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 ARFGAP1Q8N6T3 406 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 FBXO30Q8TB52 745 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 NTAN1Q96AB6 310 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 DGCR6LQ9BY27 220 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 SENP6Q9GZR1 1112 aaPredicted RBP8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 RAB6CQ9H0N0 254 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 EPS8L2Q9H6S3 715 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 RBPJLQ9UBG7 517 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 UBA2Q9UBT2 640 aaPredicted RBP8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 SLC13A4Q9UKG4 626 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 TNPO3Q9Y5L0 923 aaKnown RBP8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 DDX60Q8IY21 1712 aaKnown RBP8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 CCDC189A1A4V9 331 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 FAM149AA5PLN7 773 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 MSI1O43347 362 aaKnown RBP8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 DLX3O60479 287 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 AHSGP02765 367 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 MMP3P08254 477 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 CKMT2P17540 419 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 BRCC3P46736 316 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 ZNF157P51786 506 aaPredicted RBP8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 HUNKP57058 714 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 RHOAP61586 193 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 GHRHRQ02643 423 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 LRRC74AQ0VAA2 488 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 EPS8Q12929 822 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 TIGD2Q4W5G0 525 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 CMPK2Q5EBM0 449 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 SH3D19Q5HYK7 790 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 SMYD5Q6GMV2 418 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 AHI1Q8N157 1196 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 DNAJC1Q96KC8 554 aaKnown RBP8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 TBATAQ96M53 351 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 DHRS4Q9BTZ2 278 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 RHOBTB2Q9BYZ6 727 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 EXOSC4Q9NPD3 245 aaKnown RBP8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 TMPRSS4Q9NRS4 437 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 IMPAD1Q9NX62 359 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 VPS28Q9UK41 221 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 LSM7Q9UK45 103 aaKnown RBP8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 INVSQ9Y283 1065 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 TSC22D4Q9Y3Q8 395 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 MFHAS1Q9Y4C4 1052 aa8.23□□□□□ -1.09
PRKAB1-207ENST00000542698 SLC22A3O75751 556 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms