RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 PRAMEF11O60813 436 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 SORBS2O94875 1100 aaKnown RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 EPOP01588 193 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 FGF1P05230 155 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 PIM1P11309 404 aaPredicted RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 RAG1P15918 1043 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 GRK4P32298 578 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 KPNA1P52294 538 aaPredicted RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 MAXP61244 160 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 ITKQ08881 620 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 SMARCB1Q12824 385 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 IHHQ14623 411 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 MBTPS1Q14703 1052 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 MAPRE2Q15555 327 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 ZNF423Q2M1K9 1284 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 C5orf22Q49AR2 442 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 CTXN3Q4LDR2 81 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 ZNF789Q5FWF6 425 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 PPM1LQ5SGD2 360 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 RAP1GAP2Q684P5 730 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 OR52E8Q6IFG1 317 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 ZFP1Q6P2D0 407 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 RNF180Q86T96 592 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 PGBD5Q8N414 524 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 GPR150Q8NGU9 434 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 SPPL2BQ8TCT7 592 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 IGSF8Q969P0 613 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 RCN3Q96D15 328 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 L3HYPDHQ96EM0 354 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 FAM193BQ96PV7 902 aaPredicted RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 NDNQ99608 321 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 POLR1EQ9GZS1 481 aaKnown RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 EFCAB1Q9HAE3 211 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 TMEM161AQ9NX61 479 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 HACD3Q9P035 362 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 MARCH2Q9P0N8 246 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 DLGAP2Q9P1A6 1054 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 PDP2Q9P2J9 529 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 UXTQ9UBK9 157 aaPredicted RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 ADAMTS6Q9UKP5 1117 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 PSMD13Q9UNM6 376 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 PRG3Q9Y2Y8 225 aaPredicted RBP6.58□□□□□ -1.36
PTPRO-208ENST00000542557 GREB1Q4ZG55 1949 aa6.58□□□□□ -1.36
PTPRO-208ENST00000542557 CHD5Q8TDI0 1954 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 S1PR4O95977 384 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 ZDHHC11BP0C7U3 371 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 FDXRP22570 491 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 FGFR3P22607 806 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 PAX7P23759 505 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 PSMD8P48556 350 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 ERFP50548 548 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 SUOXP51687 545 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 ACLYP53396 1101 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 PRAMEP78395 509 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 SQLEQ14534 574 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 POLD3Q15054 466 aaPredicted RBP6.57□□□□□ -1.36
PTPRO-208ENST00000542557 OGFRL1Q5TC84 451 aaPredicted RBP6.57□□□□□ -1.36
PTPRO-208ENST00000542557 TMEM198Q66K66 360 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 NXNQ6DKJ4 435 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 KDELC2Q7Z4H8 507 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 CUZD1Q86UP6 607 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 SPATA6LQ8N4H0 392 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 C2orf15Q8WU43 125 aaKnown RBP6.57□□□□□ -1.36
PTPRO-208ENST00000542557 BTBD9Q96Q07 612 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 ELAC1Q9H777 363 aaKnown RBP6.57□□□□□ -1.36
PTPRO-208ENST00000542557 PDFQ9HBH1 243 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 ACSS2Q9NR19 701 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 GTSE1Q9NYZ3 720 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 ASB3Q9Y575 518 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 TLL2Q9Y6L7 1015 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 TTC3P53804 2025 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 TCAF2A6NFQ2 919 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 NEMP2A6NFY4 417 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 TMEM233B4DJY2 109 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 ALDH1A1P00352 501 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 LYNP07948 512 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 CCDC166P0CW27 439 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 OGNP20774 298 aaKnown RBP6.57□□□□□ -1.36
PTPRO-208ENST00000542557 IMPDH1P20839 514 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 KCNA5P22460 613 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 ATP4BP51164 291 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 ARSDP51689 593 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 THOP1P52888 689 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 GPR17Q13304 367 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 PQLC1Q8N2U9 271 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 ATAD1Q8NBU5 361 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 GDPD5Q8WTR4 605 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 HDAC10Q969S8 669 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 SGF29Q96ES7 293 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 RPRD1AQ96P16 312 aaPredicted RBP6.57□□□□□ -1.36
PTPRO-208ENST00000542557 TRAPPC9Q96Q05 1148 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 ASB2Q96Q27 587 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 GSTO2Q9H4Y5 243 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 WDR41Q9HAD4 459 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 NMRK2Q9NPI5 230 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 MRPL40Q9NQ50 206 aaKnown RBP6.57□□□□□ -1.36
PTPRO-208ENST00000542557 SARDHQ9UL12 918 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 ANKRD36A6QL64 1941 aa6.57□□□□□ -1.36
PTPRO-208ENST00000542557 SLC12A8A0AV02 714 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 MTMR11A4FU01 709 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms