RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 TCP11X1B4DZS4 312 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 MAP3K13O43283 966 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 TIMM44O43615 452 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 FAM107AO95990 144 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 SLC4A1P02730 911 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 NDUFV2P19404 249 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 SLC1A2P43004 574 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 EPHB1P54762 984 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 CSE1LP55060 971 aaKnown RBP11.07□□□□□ -0.64
SCG3-202ENST00000542355 AP1S1P61966 158 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 ECT2LQ008S8 904 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 LAMB3Q13751 1172 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 EML3Q32P44 896 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 PPM1JQ5JR12 505 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 RALGPS1Q5JS13 557 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 ANKRD54Q6NXT1 300 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 TMEM184AQ6ZMB5 413 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 GLT6D1Q7Z4J2 308 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 CPLX4Q7Z7G2 160 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 PNPLA1Q8N8W4 532 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 ZNF557Q8N988 423 aaPredicted RBP11.07□□□□□ -0.64
SCG3-202ENST00000542355 ACVR1CQ8NER5 493 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 MDGA1Q8NFP4 955 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 OR13C4Q8NGS5 318 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 ASIC4Q96FT7 647 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 VPS39Q96JC1 886 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 DNAJC1Q96KC8 554 aaKnown RBP11.07□□□□□ -0.64
SCG3-202ENST00000542355 MAGEB18Q96M61 343 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 FAM111AQ96PZ2 611 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 HS3ST2Q9Y278 367 aa11.07□□□□□ -0.64
SCG3-202ENST00000542355 OR51F1A6NGY5 319 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 HEPACAM2A8MVW5 462 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 FZD6O60353 706 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 PIGNO95427 931 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 CRTAMO95727 393 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 TOP3BO95985 862 aaKnown RBP11.06□□□□□ -0.64
SCG3-202ENST00000542355 CYP17A1P05093 508 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 SAT1P21673 171 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 FOXN2P32314 431 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 BMP8BP34820 402 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 CCNFP41002 786 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 BCL2L1Q07817 233 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 PDE1CQ14123 709 aaPredicted RBP11.06□□□□□ -0.64
SCG3-202ENST00000542355 GRM3Q14832 879 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 GEN1Q17RS7 908 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 ARMC12Q5T9G4 340 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 TMEM215Q68D42 235 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 MBLAC2Q68D91 279 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 CMC1Q7Z7K0 106 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 ZC3HC1Q86WB0 502 aaKnown RBP11.06□□□□□ -0.64
SCG3-202ENST00000542355 LRRC34Q8IZ02 419 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 OTUD6BQ8N6M0 293 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 PAF1Q8N7H5 531 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 EFHBQ8N7U6 833 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 C2CD4AQ8NCU7 369 aaPredicted RBP11.06□□□□□ -0.64
SCG3-202ENST00000542355 OR2AP1Q8NGE2 309 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 CALML6Q8TD86 181 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 STYXQ8WUJ0 223 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 FAM167BQ9BTA0 163 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 MCMBPQ9BTE3 642 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 EBF3Q9H4W6 596 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 PCDH12Q9NPG4 1184 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 SNX15Q9NRS6 342 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 GDE1Q9NZC3 331 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 SLC25A13Q9UJS0 675 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 FBXO5Q9UKT4 447 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 TRANK1O15050 2925 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 A0A0U1RQS6 177 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 SLC7A4O43246 635 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 LZTS3O60299 673 aaPredicted RBP11.06□□□□□ -0.64
SCG3-202ENST00000542355 SIN3BO75182 1162 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 HAUS5O94927 633 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 IGSF6O95976 241 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 ADH5P11766 374 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 BMP1P13497 986 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 ARSAP15289 507 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 POLR2EP19388 210 aaKnown RBP11.06□□□□□ -0.64
SCG3-202ENST00000542355 DNAJA1P31689 397 aaKnown RBP11.06□□□□□ -0.64
SCG3-202ENST00000542355 CRHR1P34998 444 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 SNRPD1P62314 119 aaKnown RBP11.06□□□□□ -0.64
SCG3-202ENST00000542355 SULT2A1Q06520 285 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 UGP2Q16851 508 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 AHI1Q8N157 1196 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 OR4K2Q8NGD2 314 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 ACMSDQ8TDX5 336 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 ZNF473Q8WTR7 871 aaKnown RBP11.06□□□□□ -0.64
SCG3-202ENST00000542355 SORCS1Q8WY21 1168 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 PEX13Q92968 403 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 SLC2A11Q9BYW1 496 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 VPS11Q9H270 941 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 RHOJQ9H4E5 214 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 FBXO6Q9NRD1 293 aaPredicted RBP11.06□□□□□ -0.64
SCG3-202ENST00000542355 SLC39A10Q9ULF5 831 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 PLLPQ9Y342 182 aa11.06□□□□□ -0.64
SCG3-202ENST00000542355 SZT2Q5T011 3432 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 XIRP2A4UGR9 3374 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 CEP290O15078 2479 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 PDE4DIPQ5VU43 2346 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 CXorf51AA0A1B0GTR3 108 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms