RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 SCN9AQ15858 1988 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 F8W810 466 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 H3BMM5 538 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 FGF10O15520 208 aaPredicted RBP16.16■□□□□ 0.18
VARS2-212ENST00000542001 OCA2Q04671 838 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 MAGEC3Q8TD91 643 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 VPS33AQ96AX1 596 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 ADGRE3Q9BY15 652 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 DGCR6LQ9BY27 220 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 SSU72Q9NP77 194 aaKnown RBP16.16■□□□□ 0.18
VARS2-212ENST00000542001 IGKV6D-21A0A0A0MT36 114 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 CNTN5O94779 1100 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 IPO13O94829 963 aaKnown RBP16.16■□□□□ 0.18
VARS2-212ENST00000542001 LBPP18428 481 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 IGFBP6P24592 240 aaPredicted RBP16.16■□□□□ 0.18
VARS2-212ENST00000542001 IL2P60568 153 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 ECT2LQ008S8 904 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 NAB1Q13506 487 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 C16orf72Q14CZ0 275 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 MON1AQ86VX9 555 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 SMAD5Q99717 465 aaKnown RBP16.16■□□□□ 0.18
VARS2-212ENST00000542001 MIOSQ9NXC5 875 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 SORCS3Q9UPU3 1222 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 DERAQ9Y315 318 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 TLL2Q9Y6L7 1015 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 LRP5O75197 1615 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 DDX60Q8IY21 1712 aaKnown RBP16.16■□□□□ 0.18
VARS2-212ENST00000542001 GLTPD2A6NH11 291 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 AXIN1O15169 862 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 DLX3O60479 287 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 EDNRBP24530 442 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 LSM3P62310 102 aaKnown RBP16.16■□□□□ 0.18
VARS2-212ENST00000542001 DMC1Q14565 340 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 PRSS55Q6UWB4 352 aaPredicted RBP16.16■□□□□ 0.18
VARS2-212ENST00000542001 NPWQ8N729 165 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 FAM47BQ8NA70 645 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 ZNF555Q8NEP9 628 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 DACT3Q96B18 629 aaPredicted RBP16.16■□□□□ 0.18
VARS2-212ENST00000542001 GPR21Q99679 349 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 ELOVL6Q9H5J4 265 aa16.16■□□□□ 0.18
VARS2-212ENST00000542001 A0A0J9YYE9 177 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 NPEPPSL1A6NEC2 478 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 AZIN1O14977 448 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 GM2AP17900 193 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 ITGALP20701 1170 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 EFNA1P20827 205 aaPredicted RBP16.15■□□□□ 0.18
VARS2-212ENST00000542001 PRKCHP24723 683 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 SOAT1P35610 550 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 ACTR3P61158 418 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 DLG1Q12959 904 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 ITGA7Q13683 1181 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 C14orf80Q86SX3 495 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 ELMOD1Q8N336 334 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 OR4L1Q8NH43 312 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 LRTOMTQ8WZ04 291 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 MED8Q96G25 268 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 PPP1R2P1Q96PQ5 205 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 DPY30Q9C005 99 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 CNTN6Q9UQ52 1028 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 TCAF1Q9Y4C2 921 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 NRP2O60462 931 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 GSNP06396 782 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 IL4RP24394 825 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 POU1F1P28069 291 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 SMAD3P84022 425 aaKnown RBP16.15■□□□□ 0.18
VARS2-212ENST00000542001 PPIDQ08752 370 aaKnown RBP16.15■□□□□ 0.18
VARS2-212ENST00000542001 SLC5A9Q2M3M2 681 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 GDF6Q6KF10 455 aaPredicted RBP16.15■□□□□ 0.18
VARS2-212ENST00000542001 BNIPLQ7Z465 357 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 ST13P5Q8NFI4 369 aaPredicted RBP16.15■□□□□ 0.18
VARS2-212ENST00000542001 STAG3L4Q8TBR4 150 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 LINGO1Q96FE5 620 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 NPY6RQ99463 290 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 ATP11BQ9Y2G3 1177 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 GIT1Q9Y2X7 761 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 CEP290O15078 2479 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 MAGEC1O60732 1142 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 WFS1O76024 890 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 ZBTB11O95625 1053 aaPredicted RBP16.15■□□□□ 0.18
VARS2-212ENST00000542001 STAU1O95793 577 aaKnown RBP16.15■□□□□ 0.18
VARS2-212ENST00000542001 ACVRL1P37023 503 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 CLCN5P51795 746 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 TSNQ15631 228 aaKnown RBP16.15■□□□□ 0.18
VARS2-212ENST00000542001 AASDHQ4L235 1098 aaPredicted RBP16.15■□□□□ 0.18
VARS2-212ENST00000542001 STXBP5Q5T5C0 1151 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 OFCC1Q8IZS5 231 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 ZBED3Q96IU2 234 aaPredicted RBP16.15■□□□□ 0.18
VARS2-212ENST00000542001 CDK15Q96Q40 435 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 SPAG4Q9NPE6 437 aa16.15■□□□□ 0.18
VARS2-212ENST00000542001 DPYSL4O14531 572 aa16.14■□□□□ 0.18
VARS2-212ENST00000542001 RAB27AP51159 221 aa16.14■□□□□ 0.18
VARS2-212ENST00000542001 DGCR6Q14129 220 aa16.14■□□□□ 0.18
VARS2-212ENST00000542001 ARMC12Q5T9G4 340 aa16.14■□□□□ 0.18
VARS2-212ENST00000542001 GCNT7Q6ZNI0 430 aa16.14■□□□□ 0.18
VARS2-212ENST00000542001 HERC6Q8IVU3 1022 aa16.14■□□□□ 0.18
VARS2-212ENST00000542001 RNF168Q8IYW5 571 aaPredicted RBP16.14■□□□□ 0.18
VARS2-212ENST00000542001 NAT16Q8N8M0 369 aa16.14■□□□□ 0.18
VARS2-212ENST00000542001 EIF3LQ9Y262 564 aaKnown RBP16.14■□□□□ 0.18
VARS2-212ENST00000542001 NUP205Q92621 2012 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 A0A087X1B8 175 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms