RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 LMAN2Q12907 356 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 RTL10Q7L3V2 364 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 CCDC185Q8N715 623 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 HIPK4Q8NE63 616 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 DENND1AQ8TEH3 1009 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 SPATA13Q96N96 652 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 RBM12Q9NTZ6 932 aaKnown RBP8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 KLHL28Q9NXS3 571 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 COCHO43405 550 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 ABCB1P08183 1280 aaPredicted RBP8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 HNRNPKP61978 463 aaKnown RBP eCLIP8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 RPP38P78345 283 aaKnown RBP8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 BMPR2Q13873 1038 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 HSP90AA5PQ58FG0 334 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 LDLRAP1Q5SW96 308 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 PIK3R6Q5UE93 754 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 PAGE2Q7Z2X7 111 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 RALGPS2Q86X27 583 aaPredicted RBP8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 PRMT1Q99873 361 aaKnown RBP8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 CARD9Q9H257 536 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 PABPC3Q9H361 631 aaKnown RBP8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 MRPL40Q9NQ50 206 aaKnown RBP8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 WRAP73Q9P2S5 460 aaPredicted RBP8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 SUFUQ9UMX1 484 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 TMEM114B3SHH9 223 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 SGTAO43765 313 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 SERPINI2O75830 405 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 HOXC12P31275 282 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 NOMO3P69849 1222 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 PDE1CQ14123 709 aaPredicted RBP8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 ATP13A5Q4VNC0 1218 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 PITRM1Q5JRX3 1037 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 ARHGAP17Q68EM7 881 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 AMZ2Q86W34 360 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 ZCCHC9Q8N567 271 aaKnown RBP8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 RTL3Q8N8U3 475 aaKnown RBP8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 NETO2Q8NC67 525 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 PSMG2Q969U7 264 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 MTFMTQ96DP5 389 aaKnown RBP8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 KLC4Q9NSK0 619 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 PCDHA3Q9Y5H8 950 aa8.68□□□□□ -1.02
FNDC3A-206ENST00000541916 HIDE1A8MVS5 230 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 PRLRP16471 622 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 CXCR3P49682 368 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 STX3Q13277 289 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 PTPRNQ16849 979 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 RASIP1Q5U651 963 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 ICE2Q659A1 982 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 ADAMTS19Q8TE59 1207 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 NAF1Q96HR8 494 aaKnown RBP8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 DUSP9Q99956 384 aaKnown RBP8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 IL22Q9GZX6 179 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 FANCFQ9NPI8 374 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 HCFC1R1Q9NWW0 138 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 H2AFY2Q9P0M6 372 aaPredicted RBP8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 SUCOQ9UBS9 1254 aaKnown RBP8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 WFS1O76024 890 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 WNT3AP56704 352 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 ERVFC1P60507 584 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 GSTA3Q16772 222 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 C11orf63Q6NUN7 778 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 NEPROQ6NW34 567 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 MSANTD2Q6P1R3 559 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 BRAT1Q6PJG6 821 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 LIX1Q8N485 282 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 NTPCRQ9BSD7 190 aaKnown RBP8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 SHCBP1LQ9BZQ2 653 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 COPS7AQ9UBW8 275 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 SERTAD3Q9UJW9 196 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 HCN2Q9UL51 889 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 POLR1DQ9Y2S0 133 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 STRCP1A6NGW2 1772 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 XYLT1Q86Y38 959 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 OXR1Q8N573 874 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 GPR156Q8NFN8 814 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 OR52K1Q8NGK4 314 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 SEMA4DQ92854 862 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 PDLIM2Q96JY6 352 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 ATP6V1G3Q96LB4 118 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 RNF157Q96PX1 679 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 CPXM1Q96SM3 734 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 PRKAB1Q9Y478 270 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 SNX10Q9Y5X0 201 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 PAPPAQ13219 1627 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 GTPBP1O00178 669 aaKnown RBP8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 RAD51CO43502 376 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 SDC3O75056 442 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 RPSAP08865 295 aaKnown RBP8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 VSNL1P62760 191 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 IL10RBQ08334 325 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 EIF4HQ15056 248 aaKnown RBP8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 SLC26A9Q7LBE3 791 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 TRIML2Q8N7C3 387 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 OR4L1Q8NH43 312 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 HDAC7Q8WUI4 952 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 MIOSQ9NXC5 875 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 ARIH1Q9Y4X5 557 aaPredicted RBP8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 TRIM49D1C9J1S8 452 aa8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 DCNP07585 359 aaKnown RBP8.67□□□□□ -1.02
FNDC3A-206ENST00000541916 COPZ1P61923 177 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms