RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 SAPCD2Q86UD0 394 aa10.78□□□□□ -0.68
GABRB3-204ENST00000541819 TTC29Q8NA56 475 aaPredicted RBP10.78□□□□□ -0.68
GABRB3-204ENST00000541819 MATN4O95460 622 aa10.78□□□□□ -0.68
GABRB3-204ENST00000541819 SP100P23497 879 aaPredicted RBP10.78□□□□□ -0.68
GABRB3-204ENST00000541819 SULT2A1Q06520 285 aa10.78□□□□□ -0.68
GABRB3-204ENST00000541819 DLG1Q12959 904 aa10.78□□□□□ -0.68
GABRB3-204ENST00000541819 XKR4Q5GH76 650 aa10.78□□□□□ -0.68
GABRB3-204ENST00000541819 ATXN7L2Q5T6C5 722 aaPredicted RBP10.78□□□□□ -0.68
GABRB3-204ENST00000541819 TMC3Q7Z5M5 1100 aa10.78□□□□□ -0.68
GABRB3-204ENST00000541819 AMIGO1Q86WK6 493 aa10.78□□□□□ -0.68
GABRB3-204ENST00000541819 RAVER1Q8IY67 606 aaKnown RBP10.78□□□□□ -0.68
GABRB3-204ENST00000541819 OR2L5Q8NG80 312 aa10.78□□□□□ -0.68
GABRB3-204ENST00000541819 KBTBD4Q9NVX7 518 aa10.78□□□□□ -0.68
GABRB3-204ENST00000541819 MTRRQ9UBK8 725 aa10.78□□□□□ -0.68
GABRB3-204ENST00000541819 SAMHD1Q9Y3Z3 626 aaKnown RBP10.78□□□□□ -0.68
GABRB3-204ENST00000541819 PRDM15P57071 1507 aaPredicted RBP10.78□□□□□ -0.68
GABRB3-204ENST00000541819 SLC25A14O95258 325 aaPredicted RBP10.77□□□□□ -0.68
GABRB3-204ENST00000541819 LCA5LO95447 670 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 TRUB2O95900 331 aaKnown RBP10.77□□□□□ -0.68
GABRB3-204ENST00000541819 CCNB1P14635 433 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 KDELR1P24390 212 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 DNASE1L1P49184 302 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 MANFP55145 182 aaKnown RBP10.77□□□□□ -0.68
GABRB3-204ENST00000541819 ZNF155Q12901 538 aaPredicted RBP10.77□□□□□ -0.68
GABRB3-204ENST00000541819 RIPK1Q13546 671 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 ITPK1Q13572 414 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 WSCD1Q658N2 575 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 MAP1SQ66K74 1059 aaPredicted RBP10.77□□□□□ -0.68
GABRB3-204ENST00000541819 ZCCHC12Q6PEW1 402 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 KATNAL2Q8IYT4 538 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 NRSN1Q8IZ57 195 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 AP2M1Q96CW1 435 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 ZHX1-C8orf76Q96EF9 292 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 DDX20Q9UHI6 824 aaKnown RBP10.77□□□□□ -0.68
GABRB3-204ENST00000541819 IQSEC2Q5JU85 1478 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 TRIM64A6NGJ6 449 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 SUV39H1O43463 412 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 TLL1O43897 1013 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 SNAP91O60641 907 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 ZNF432O94892 652 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 PRKAR2AP13861 404 aaKnown RBP10.77□□□□□ -0.68
GABRB3-204ENST00000541819 CDC25CP30307 473 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 MEA1Q16626 185 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 FAM83AQ86UY5 434 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 MEIOBQ8N635 442 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 POC5Q8NA72 575 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 S100ZQ8WXG8 99 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.77□□□□□ -0.68
GABRB3-204ENST00000541819 GGA2Q9UJY4 613 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 IKZF2Q9UKS7 526 aa10.77□□□□□ -0.68
GABRB3-204ENST00000541819 NRCAMQ92823 1304 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 AREL1O15033 823 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 NR2F6P10588 404 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 RFX4Q33E94 735 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 B3GNT6Q6ZMB0 384 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 TMPRSS11AQ6ZMR5 421 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 MSANTD1Q6ZTZ1 278 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 MCMBPQ9BTE3 642 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 TMEM27Q9HBJ8 222 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 CCNB1IP1Q9NPC3 277 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 ABCB10Q9NRK6 738 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 IMP3Q9NV31 184 aaKnown RBP10.77□□□□□ -0.69
GABRB3-204ENST00000541819 BTRCQ9Y297 605 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 CROCC2H7BZ55 1655 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 RFXANKO14593 260 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 CHST10O43529 356 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 CTDNEP1O95476 244 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 CYB5AP00167 134 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 RLN1P04808 185 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 SSR2P43308 183 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 ZIK1Q3SY52 487 aaPredicted RBP10.77□□□□□ -0.69
GABRB3-204ENST00000541819 C16orf46Q6P387 395 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 POMZP3Q6PJE2 187 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 WDR60Q8WVS4 1066 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 GAL3ST3Q96A11 431 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 MBOAT7Q96N66 472 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 TAPBPLQ9BX59 468 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 ACE2Q9BYF1 805 aaPredicted RBP10.77□□□□□ -0.69
GABRB3-204ENST00000541819 BRINP2Q9C0B6 783 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 PLEKHA1Q9HB21 404 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 STOML2Q9UJZ1 356 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 MED14O60244 1454 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 TRIM38O00635 465 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 TFEBP19484 476 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 KLRK1P26718 216 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 SLC7A2P52569 658 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 ATP6V0D1P61421 351 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 FCHO2Q0JRZ9 810 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 ST3GAL1Q11201 340 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 PLA2G4EQ3MJ16 856 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 NAIF1Q69YI7 327 aaPredicted RBP10.77□□□□□ -0.69
GABRB3-204ENST00000541819 SULT1C3Q6IMI6 304 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 NET1Q7Z628 596 aaPredicted RBP10.77□□□□□ -0.69
GABRB3-204ENST00000541819 SETD6Q8TBK2 473 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 DNAJB14Q8TBM8 379 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 HELQQ8TDG4 1101 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 MRPL57Q9BQC6 102 aaKnown RBP10.77□□□□□ -0.69
GABRB3-204ENST00000541819 SORCS3Q9UPU3 1222 aa10.77□□□□□ -0.69
GABRB3-204ENST00000541819 GRM6O15303 877 aa10.76□□□□□ -0.69
GABRB3-204ENST00000541819 PSMG1O95456 288 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms