RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 NEPROQ6NW34 567 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 NOTUMQ6P988 496 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 SETD3Q86TU7 594 aaPredicted RBP10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 DDIASQ8IXT1 998 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 CMTR2Q8IYT2 770 aaKnown RBP10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 SHCBP1Q8NEM2 672 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 OR6P1Q8NGX9 317 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 PTERQ96BW5 349 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 TNIP3Q96KP6 325 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 TMEM209Q96SK2 561 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 HBEGFQ99075 208 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 SEPHS2Q99611 448 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 OSBPL11Q9BXB4 747 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 SLC39A8Q9C0K1 460 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 AKTIPQ9H8T0 292 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 TRAF6Q9Y4K3 522 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 TSC2P49815 1807 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 CASTOR2A6NHX0 329 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 F8W810 466 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 PTGESO14684 152 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 IPO13O94829 963 aaKnown RBP10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 CAPNS1P04632 268 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 APOA4P06727 396 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 SLC7A1P30825 629 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 DIO3P55073 304 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 SH3BP2P78314 561 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 PPP1R8Q12972 351 aaKnown RBP10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 RFTN1Q14699 578 aaPredicted RBP10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 HERC3Q15034 1050 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 AAK1Q2M2I8 961 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 DCAF4L1Q3SXM0 396 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 UGT3A2Q3SY77 523 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 BHLHA9Q7RTU4 235 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 ARHGAP12Q8IWW6 846 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 PAIP1Q9H074 479 aaKnown RBP10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 GSTO2Q9H4Y5 243 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 PNPLA3Q9NST1 481 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 RBM22Q9NW64 420 aaKnown RBP eCLIP10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 ANKRD6Q9Y2G4 727 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 ZNF510Q9Y2H8 683 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 TIMM22Q9Y584 194 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 A0A0G2JLL6 359 aaPredicted RBP10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 A0A0J9YYE9 177 aa10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 TRPC5OSA6NMA1 111 aa10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 INPP4BO15327 924 aa10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 TPP2P29144 1249 aaPredicted RBP10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 POLR2IP36954 125 aaKnown RBP10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 ATP1A4Q13733 1029 aa10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 MAP7D1Q3KQU3 841 aa10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 AARS2Q5JTZ9 985 aaKnown RBP10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 PCID2Q5JVF3 399 aa10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 OTUD3Q5T2D3 398 aaPredicted RBP10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 PIWIL4Q7Z3Z4 852 aaKnown RBP10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 PRRT2Q7Z6L0 340 aaPredicted RBP10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 ERI1Q8IV48 349 aaKnown RBP10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 ATPAF2Q8N5M1 289 aa10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 SMG8Q8ND04 991 aaKnown RBP10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 RDH11Q8TC12 318 aa10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 TFAP2CQ92754 450 aa10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 DPF3Q92784 378 aa10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 B3GALT6Q96L58 329 aa10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 MRPL57Q9BQC6 102 aaKnown RBP10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 CLK4Q9HAZ1 481 aaKnown RBP10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 TMEM181Q9P2C4 612 aa10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 FNDC3AQ9Y2H6 1198 aaKnown RBP10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 TCAF1Q9Y4C2 921 aa10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 IPPQ9Y573 584 aa10.4□□□□□ -0.75
CDC42SE1-207ENST00000540998 NCF1BA6NI72 391 aaPredicted RBP10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 NCF1CA8MVU1 366 aaPredicted RBP10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 PIP5K1BO14986 540 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 TREHO43280 583 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 KCNH1O95259 989 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 SNAP29O95721 258 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 HSPA1AP0DMV8 641 aaKnown RBP10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 HSPA1BP0DMV9 641 aaKnown RBP10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 CYP2C9P11712 490 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 NCF1P14598 390 aaPredicted RBP10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 VARSP26640 1264 aaKnown RBP10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 CCNA1P78396 465 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 PIGFQ07326 219 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 ANKRD34AQ69YU3 496 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 TBPL2Q6SJ96 375 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 GPR141Q7Z602 305 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 C14orf80Q86SX3 495 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 PPHLN1Q8NEY8 458 aaKnown RBP10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 OR2T34Q8NGX1 318 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 OR2T3Q8NH03 318 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 PPTC7Q8NI37 304 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 FNDC8Q8TC99 324 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 GIPC3Q8TF64 312 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 MRGPRX2Q96LB1 330 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 SMIM14Q96QK8 99 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 HAUS8Q9BT25 410 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 ADI1Q9BV57 179 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 POLR1BQ9H9Y6 1135 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 TIMMDC1Q9NPL8 285 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 CMTM6Q9NX76 183 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 MID2Q9UJV3 735 aa10.39□□□□□ -0.75
CDC42SE1-207ENST00000540998 USP34Q70CQ2 3546 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms