RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 CSPG4P5Q96PW8 444 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 PSKH2Q96QS6 385 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 APOOQ9BUR5 198 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 TCEAL2Q9H3H9 227 aaPredicted RBP9.07□□□□□ -0.96
LMO3-222ENST00000540445 USP29Q9HBJ7 922 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 ETNK2Q9NVF9 386 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 NCKIPSDQ9NZQ3 722 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 SALL4Q9UJQ4 1053 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 OR1A2Q9Y585 309 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 PCDHGC4Q9Y5F7 938 aa9.07□□□□□ -0.96
LMO3-222ENST00000540445 PTPRQQ9UMZ3 2332 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 A0A087WV48 116 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 LY6G6EA0A0G2JKS1 128 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 TSPAN11A1L157 253 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 TPP1O14773 563 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 MUSKO15146 869 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 YY2O15391 372 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 AKR1B10O60218 316 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 OPA1O60313 960 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 MAFKO60675 156 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 GCATO75600 419 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 TNFP01375 233 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 TSHRP16473 764 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 NFKBIAP25963 317 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 HSPA9P38646 679 aaKnown RBP9.06□□□□□ -0.96
LMO3-222ENST00000540445 MMP12P39900 470 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 MMP13P45452 471 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 RPIAP49247 311 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 MAXP61244 160 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 AP1S1P61966 158 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 SLC25A11Q02978 314 aaKnown RBP9.06□□□□□ -0.96
LMO3-222ENST00000540445 RTP5Q14D33 572 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 COL28A1Q2UY09 1125 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 ATP13A4Q4VNC1 1196 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 DENND2CQ68D51 928 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 SPECC1LQ69YQ0 1117 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 ESRP1Q6NXG1 681 aaKnown RBP9.06□□□□□ -0.96
LMO3-222ENST00000540445 LIPIQ6XZB0 460 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 MACC1Q6ZN28 852 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 ZSWIM9Q86XI8 627 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 MAP7D3Q8IWC1 876 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.06□□□□□ -0.96
LMO3-222ENST00000540445 ATL2Q8NHH9 583 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 IFI44Q8TCB0 444 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 MAPK15Q8TD08 544 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 TSACCQ96A04 125 aaPredicted RBP9.06□□□□□ -0.96
LMO3-222ENST00000540445 NRSN2Q9GZP1 204 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 TSPY26PQ9H489 355 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 PCDH18Q9HCL0 1135 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 GULP1Q9UBP9 304 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 MOSPD1Q9UJG1 213 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 U3KQA8 63 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 SMG1Q96Q15 3661 aaKnown RBP9.06□□□□□ -0.96
LMO3-222ENST00000540445 SCN8AQ9UQD0 1980 aa9.06□□□□□ -0.96
LMO3-222ENST00000540445 A0A1W2PQ67 120 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 CFAP69A5D8W1 941 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 LMO7DNF2Z398 122 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 CACNB4O00305 520 aaPredicted RBP9.05□□□□□ -0.96
LMO3-222ENST00000540445 TRAFD1O14545 582 aaPredicted RBP9.05□□□□□ -0.96
LMO3-222ENST00000540445 TLX3O43711 291 aaPredicted RBP9.05□□□□□ -0.96
LMO3-222ENST00000540445 RECQL5O94762 991 aaPredicted RBP9.05□□□□□ -0.96
LMO3-222ENST00000540445 RASGRP1O95267 797 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 GP1BAP07359 652 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 CD48P09326 243 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 ALPIP09923 528 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 HK3P52790 923 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 SRP54P61011 504 aaKnown RBP9.05□□□□□ -0.96
LMO3-222ENST00000540445 MESDQ14696 234 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 NFATC4Q14934 902 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 PDK2Q15119 407 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 ELOCQ15369 112 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 NR0B2Q15466 257 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 SLC18A3Q16572 532 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 ANKRD20A8PQ5CZ79 823 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 LRRC69Q6ZNQ3 347 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 EFL1Q7Z2Z2 1120 aaKnown RBP9.05□□□□□ -0.96
LMO3-222ENST00000540445 PDZD3Q86UT5 571 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 GKN2Q86XP6 184 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 NDUFAF2Q8N183 169 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 PGBD5Q8N414 524 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 DCBLD1Q8N8Z6 715 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 PLA2G15Q8NCC3 412 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 RNF214Q8ND24 703 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 ECHDC3Q96DC8 303 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 WDR92Q96MX6 357 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 DEPDC7Q96QD5 511 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 NUDCD1Q96RS6 583 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 LRRC61Q9BV99 259 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 NOD2Q9HC29 1040 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 NT5MQ9NPB1 228 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 SIRPGQ9P1W8 387 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 RCOR3Q9P2K3 495 aaPredicted RBP9.05□□□□□ -0.96
LMO3-222ENST00000540445 UVRAGQ9P2Y5 699 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 KLQ9UEF7 1012 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 PNMA8BQ9ULN7 279 aaPredicted RBP9.05□□□□□ -0.96
LMO3-222ENST00000540445 PHTF1Q9UMS5 762 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 BAHCC1Q9P281 2608 aa9.05□□□□□ -0.96
LMO3-222ENST00000540445 ATRXP46100 2492 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 MGAQ8IWI9 3026 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 EME2A4GXA9 379 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms