RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 PAGE2BQ5JRK9 111 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 ATF7IP2Q5U623 682 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 BROXQ5VW32 411 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 OFCC1Q8IZS5 231 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 OR5B17Q8NGF7 314 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 TBC1D15Q8TC07 691 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 RAB2BQ8WUD1 216 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 COG8Q96MW5 612 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 NPAS2Q99743 824 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 HGH1Q9BTY7 390 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 ADI1Q9BV57 179 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 GDAP2Q9NXN4 497 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 STMN3Q9NZ72 180 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 TMEM9Q9P0T7 183 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 RABL2AQ9UBK7 228 aaPredicted RBP8.73□□□□□ -1.01
DDB1-217ENST00000540166 MGAMO43451 1857 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 LOC285556D6RIA3 1793 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 A0A1B0GTW7 788 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 STX16-NPEPL1H3BU86 382 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 M0QYV0 167 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 TPP1O14773 563 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 ARHGEF9O43307 516 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 CD48P09326 243 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 HOXB8P17481 243 aaPredicted RBP8.73□□□□□ -1.01
DDB1-217ENST00000540166 RCVRNP35243 200 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 GDF10P55107 478 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 GHRHRQ02643 423 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 RAB39AQ14964 217 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 POLD3Q15054 466 aaPredicted RBP8.73□□□□□ -1.01
DDB1-217ENST00000540166 PHKG1Q16816 387 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 KIF19Q2TAC6 998 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 DCAF4L1Q3SXM0 396 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 LRRC38Q5VT99 294 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 SLCO6A1Q86UG4 719 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 SNX31Q8N9S9 440 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 ZNF516Q92618 1163 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 NECAB3Q96P71 396 aaPredicted RBP8.73□□□□□ -1.01
DDB1-217ENST00000540166 ST6GALNAC4Q9H4F1 302 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 RPF2Q9H7B2 306 aaKnown RBP8.73□□□□□ -1.01
DDB1-217ENST00000540166 IL1RL2Q9HB29 575 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.73□□□□□ -1.01
DDB1-217ENST00000540166 SEPT10Q9P0V9 454 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 TBC1D14Q9P2M4 693 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 NOX1Q9Y5S8 564 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 SLC30A1Q9Y6M5 507 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 A0A0U1RQF3 1178 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 TOR1BO14657 336 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 PMM2O15305 246 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 HTRA2O43464 458 aaPredicted RBP8.73□□□□□ -1.01
DDB1-217ENST00000540166 TRIM13O60858 407 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 CCNKO75909 580 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 PDGFRAP16234 1089 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 PTPN1P18031 435 aaKnown RBP8.73□□□□□ -1.01
DDB1-217ENST00000540166 MMP8P22894 467 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 SOX11P35716 441 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 NRLP54845 237 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 TRIM25Q14258 630 aaKnown RBP8.73□□□□□ -1.01
DDB1-217ENST00000540166 PLCL1Q15111 1095 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 DGUOKQ16854 277 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 CRTC3Q6UUV7 619 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 COLGALT1Q8NBJ5 622 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 OR7A2PQ8NGA2 310 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 GRIN3AQ8TCU5 1115 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 WNT8BQ93098 351 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 STRA6Q9BX79 667 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 COL25A1Q9BXS0 654 aaPredicted RBP8.73□□□□□ -1.01
DDB1-217ENST00000540166 NIF3L1Q9GZT8 377 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 CDH19Q9H159 772 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 FANCEQ9HB96 536 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 RGS18Q9NS28 235 aa8.73□□□□□ -1.01
DDB1-217ENST00000540166 ZNFX1Q9P2E3 1918 aaKnown RBP8.72□□□□□ -1.01
DDB1-217ENST00000540166 A8MU76 341 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 H7C4K7 107 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 CCRL2O00421 344 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 GNGT2O14610 69 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 KDELR1P24390 212 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 SLC12A2P55011 1212 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 SF3B4Q15427 424 aaKnown RBP eCLIP8.72□□□□□ -1.011e-7■■■■□ 20.8
DDB1-217ENST00000540166 WDR45BQ5MNZ6 344 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 NEPROQ6NW34 567 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 MMAAQ8IVH4 418 aaKnown RBP8.72□□□□□ -1.01
DDB1-217ENST00000540166 PCYOX1LQ8NBM8 494 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 APPL2Q8NEU8 664 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 BEST2Q8NFU1 509 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 ADAM32Q8TC27 787 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 MAGEE2Q8TD90 523 aaPredicted RBP8.72□□□□□ -1.01
DDB1-217ENST00000540166 LPGAT1Q92604 370 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 PABPC5Q96DU9 382 aaKnown RBP8.72□□□□□ -1.01
DDB1-217ENST00000540166 SLX1AQ9BQ83 275 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 SIAEQ9HAT2 523 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.72□□□□□ -1.01
DDB1-217ENST00000540166 DZANK1Q9NVP4 752 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 RIMS3Q9UJD0 308 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 POU2F3Q9UKI9 436 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 PSME2Q9UL46 239 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 IFT52Q9Y366 437 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 PTPRFP10586 1907 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 MBLAC1A4D2B0 266 aaPredicted RBP8.72□□□□□ -1.01
DDB1-217ENST00000540166 PDZK1P1A8MUH7 402 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 HDAC3O15379 428 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms