RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 TRBC1P01850 177 aa16.23■□□□□ 0.19
TRAF3-204ENST00000539721 PRNPP04156 253 aa16.23■□□□□ 0.19
TRAF3-204ENST00000539721 ALPIP09923 528 aa16.23■□□□□ 0.19
TRAF3-204ENST00000539721 PAMP19021 973 aa16.23■□□□□ 0.19
TRAF3-204ENST00000539721 KIR2DL1P43626 348 aaPredicted RBP16.23■□□□□ 0.19
TRAF3-204ENST00000539721 SLCO1A2P46721 670 aa16.23■□□□□ 0.19
TRAF3-204ENST00000539721 ELAVL3Q14576 367 aaKnown RBP16.23■□□□□ 0.19
TRAF3-204ENST00000539721 TAF1AQ15573 450 aaPredicted RBP16.23■□□□□ 0.19
TRAF3-204ENST00000539721 SMAD1Q15797 465 aaKnown RBP16.23■□□□□ 0.19
TRAF3-204ENST00000539721 SLC44A4Q53GD3 710 aa16.23■□□□□ 0.19
TRAF3-204ENST00000539721 ESRP1Q6NXG1 681 aaKnown RBP16.23■□□□□ 0.19
TRAF3-204ENST00000539721 CROCCP2Q86T23 111 aa16.23■□□□□ 0.19
TRAF3-204ENST00000539721 MDGA1Q8NFP4 955 aa16.23■□□□□ 0.19
TRAF3-204ENST00000539721 MRRFQ96E11 262 aaKnown RBP16.23■□□□□ 0.19
TRAF3-204ENST00000539721 CERS2Q96G23 380 aa16.23■□□□□ 0.19
TRAF3-204ENST00000539721 THEGQ9P2T0 379 aa16.23■□□□□ 0.19
TRAF3-204ENST00000539721 SLC2A6Q9UGQ3 507 aa16.23■□□□□ 0.19
TRAF3-204ENST00000539721 DUSP12Q9UNI6 340 aa16.23■□□□□ 0.19
TRAF3-204ENST00000539721 UNC80Q8N2C7 3258 aa16.23■□□□□ 0.19
TRAF3-204ENST00000539721 MROH6A6NGR9 719 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 FAM159BA6NKW6 160 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 TCEA3O75764 348 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 PIAS1O75925 651 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 PAPSS2O95340 614 aaPredicted RBP16.22■□□□□ 0.19
TRAF3-204ENST00000539721 SLC4A1P02730 911 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 MYZAPP0CAP1 466 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 POLR2LP62875 67 aaKnown RBP16.22■□□□□ 0.19
TRAF3-204ENST00000539721 ZP2Q05996 745 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 ENPP2Q13822 863 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 FRG1Q14331 258 aaKnown RBP16.22■□□□□ 0.19
TRAF3-204ENST00000539721 PTPRRQ15256 657 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 BRAT1Q6PJG6 821 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 TPRG1Q6ZUI0 275 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 CYS1Q717R9 158 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 RASSF3Q86WH2 238 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 CTAGE3PQ8IX95 158 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 FAM3CQ92520 227 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 CDKL2Q92772 493 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 CENPHQ9H3R5 247 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 MAGEE1Q9HCI5 957 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 PRSS16Q9NQE7 514 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 TREX1Q9NSU2 369 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 C20orf96Q9NUD7 363 aaPredicted RBP16.22■□□□□ 0.19
TRAF3-204ENST00000539721 IL1RAPL1Q9NZN1 696 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 ZNF711Q9Y462 761 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 KCTD3Q9Y597 815 aa16.22■□□□□ 0.19
TRAF3-204ENST00000539721 CAPN8A6NHC0 703 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 C2orf81A6NN90 581 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 KPNA3O00505 521 aaPredicted RBP16.21■□□□□ 0.19
TRAF3-204ENST00000539721 AURKAO14965 403 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 BUD23O43709 281 aaKnown RBP16.21■□□□□ 0.19
TRAF3-204ENST00000539721 C1QAP02745 245 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 ERVK-10P10266 1014 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 MGAT5Q09328 741 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 CNGA3Q16281 694 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 C2orf27AQ580R0 203 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 HSP90B2PQ58FF3 399 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 ZNF805Q5CZA5 627 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 KIAA0930Q6ICG6 404 aaPredicted RBP16.21■□□□□ 0.19
TRAF3-204ENST00000539721 USP45Q70EL2 814 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 DSG4Q86SJ6 1040 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 KCNMB4Q86W47 210 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 PPM1NQ8N819 430 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 TMIEQ8NEW7 156 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 ERLEC1Q96DZ1 483 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 SRPK1Q96SB4 655 aaKnown RBP16.21■□□□□ 0.19
TRAF3-204ENST00000539721 PAFAH2Q99487 392 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 SH3GL2Q99962 352 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 TRABDQ9H4I3 376 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 PPCSQ9HAB8 311 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 SMYD2Q9NRG4 433 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 VPS18Q9P253 973 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 FETUBQ9UGM5 382 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 SLC24A2Q9UI40 661 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 CKAP5Q14008 2032 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 ATG2BQ96BY7 2078 aa16.21■□□□□ 0.19
TRAF3-204ENST00000539721 TSPAN11A1L157 253 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 CXorf49A8MYA2 514 aaPredicted RBP16.21■□□□□ 0.18
TRAF3-204ENST00000539721 VAPBO95292 243 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 HNF1BP35680 557 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 MSH2P43246 934 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 TMPRSS15P98073 1019 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 PDE1BQ01064 536 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 MLF2Q15773 248 aaPredicted RBP16.21■□□□□ 0.18
TRAF3-204ENST00000539721 SKIDA1Q1XH10 827 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 POM121L1PQ3SYA9 428 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 PDPK2PQ6A1A2 396 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 SDE2Q6IQ49 451 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 ZNF449Q6P9G9 518 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 OR13C4Q8NGS5 318 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 OR13J1Q8NGT2 312 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 PIP4K2CQ8TBX8 421 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 KCNV2Q8TDN2 545 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 STYXQ8WUJ0 223 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 SPOCK2Q92563 424 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 PEX13Q92968 403 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 DNAJC1Q96KC8 554 aaKnown RBP16.21■□□□□ 0.18
TRAF3-204ENST00000539721 FAM129BQ96TA1 746 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 GPR63Q9BZJ6 419 aa16.21■□□□□ 0.18
TRAF3-204ENST00000539721 TMBIM4Q9HC24 238 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms