RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 KCNH6Q9H252 994 aa13.06□□□□□ -0.32
CCDC42-202ENST00000539522 SGK2Q9HBY8 427 aa13.06□□□□□ -0.32
CCDC42-202ENST00000539522 TMEM74BQ9NUR3 256 aa13.06□□□□□ -0.32
CCDC42-202ENST00000539522 B4GALT6Q9UBX8 382 aa13.06□□□□□ -0.32
CCDC42-202ENST00000539522 FAM153AQ9UHL3 310 aa13.06□□□□□ -0.32
CCDC42-202ENST00000539522 RAB21Q9UL25 225 aa13.06□□□□□ -0.32
CCDC42-202ENST00000539522 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.06□□□□□ -0.32
CCDC42-202ENST00000539522 PCDH15Q96QU1 1955 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 TRPM6Q9BX84 2022 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 GPR179Q6PRD1 2367 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 A0A0J9YYE9 177 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 METTL12A8MUP2 240 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 A8MX80 341 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 AURKAO14965 403 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 RAD51BO15315 384 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 TP73O15350 636 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 RNGTTO60942 597 aaKnown RBP13.05□□□□□ -0.32
CCDC42-202ENST00000539522 USP12O75317 370 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 IFNB1P01574 187 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 TRBC1P01850 177 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 IVDP26440 423 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 MAOBP27338 520 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 CNR2P34972 360 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 GRIA1P42261 906 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 PTPN5P54829 565 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 DRG2P55039 364 aaKnown RBP13.05□□□□□ -0.32
CCDC42-202ENST00000539522 SLC7A5Q01650 507 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 RPL6Q02878 288 aaKnown RBP13.05□□□□□ -0.32
CCDC42-202ENST00000539522 CDK18Q07002 472 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 BRD3Q15059 726 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 SIRPB2Q5JXA9 342 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 ARMC12Q5T9G4 340 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 KIAA0895LQ68EN5 471 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 FBXL19Q6PCT2 694 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 CRTC1Q6UUV9 634 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 ZNF534Q76KX8 674 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 DPPA4Q7L190 304 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 ARMCX6Q7L4S7 300 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 PELI3Q8N2H9 469 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 LPCAT1Q8NF37 534 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 OR2T34Q8NGX1 318 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 GANCQ8TET4 914 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 KLK6Q92876 244 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 SCRN2Q96FV2 425 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 FEM1CQ96JP0 617 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 KLF6Q99612 283 aaPredicted RBP13.05□□□□□ -0.32
CCDC42-202ENST00000539522 APOL2Q9BQE5 337 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 RAB17Q9H0T7 212 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 DMGDHQ9UI17 866 aaKnown RBP13.05□□□□□ -0.32
CCDC42-202ENST00000539522 NCKAP1Q9Y2A7 1128 aa13.05□□□□□ -0.32
CCDC42-202ENST00000539522 UTP11Q9Y3A2 253 aaKnown RBP13.05□□□□□ -0.32
CCDC42-202ENST00000539522 A0A1W2PQU0 124 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 PRR23AA6NEV1 266 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 CAPN8A6NHC0 703 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 FAM47DPA6NHR8 397 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 ANKRD66B4E2M5 251 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 TTI1O43156 1089 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 MMP20O60882 483 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 ECEL1O95672 775 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 PIRTP0C851 137 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 ITPKAP23677 461 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 NHLH1Q02575 133 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 MPP3Q13368 585 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 SEMA5AQ13591 1074 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 SIM2Q14190 667 aaPredicted RBP13.04□□□□□ -0.32
CCDC42-202ENST00000539522 SLC1A5Q15758 541 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 CNGA3Q16281 694 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 PEAR1Q5VY43 1037 aaPredicted RBP13.04□□□□□ -0.32
CCDC42-202ENST00000539522 ANKRD22Q5VYY1 191 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 ITPRIPL1Q6GPH6 555 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 LIPIQ6XZB0 460 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 CCNI2Q6ZMN8 369 aaPredicted RBP13.04□□□□□ -0.32
CCDC42-202ENST00000539522 ARHGEF18Q6ZSZ5 1173 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 HSD11B1LQ7Z5J1 315 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 TRIM69Q86WT6 500 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 PDCD7Q8N8D1 485 aaKnown RBP13.04□□□□□ -0.32
CCDC42-202ENST00000539522 EIF1ADQ8N9N8 165 aaKnown RBP13.04□□□□□ -0.32
CCDC42-202ENST00000539522 IPMKQ8NFU5 416 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 CADM4Q8NFZ8 388 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 DNASE2BQ8WZ79 361 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 ATOH1Q92858 354 aaPredicted RBP13.04□□□□□ -0.32
CCDC42-202ENST00000539522 RAB7BQ96AH8 199 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 HSPA12BQ96MM6 686 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 LYSMD1Q96S90 227 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 FERMT1Q9BQL6 677 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 ERP44Q9BS26 406 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 WRAP53Q9BUR4 548 aaKnown RBP13.04□□□□□ -0.32
CCDC42-202ENST00000539522 FICDQ9BVA6 458 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 KDM4CQ9H3R0 1056 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 CAAP1Q9H8G2 361 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 EPB41L5Q9HCM4 733 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 PREBQ9HCU5 417 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 GDF3Q9NR23 364 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 VPS45Q9NRW7 570 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 ARGLU1Q9NWB6 273 aaPredicted RBP13.04□□□□□ -0.32
CCDC42-202ENST00000539522 PHTF1Q9UMS5 762 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 CA5BQ9Y2D0 317 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 COQ6Q9Y2Z9 468 aa13.04□□□□□ -0.32
CCDC42-202ENST00000539522 ADAMTS9Q9P2N4 1935 aa13.03□□□□□ -0.32
CCDC42-202ENST00000539522 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms