RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 ITKQ08881 620 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 NIPAL4Q0D2K0 466 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 AP1B1Q10567 949 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 ZBTB17Q13105 803 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 SUZ12Q15022 739 aaKnown RBP9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 AGERQ15109 404 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 PRKD1Q15139 912 aaPredicted RBP9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 PRAMEF14Q5SWL7 426 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 ARMC12Q5T9G4 340 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 Q6ZSR6 202 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 BBS12Q6ZW61 710 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 BZW1Q7L1Q6 419 aaKnown RBP9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 PTAR1Q7Z6K3 402 aaPredicted RBP9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 DCP2Q8IU60 420 aaKnown RBP9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 CCDC50Q8IVM0 306 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 NAXDQ8IW45 347 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 SYCE1Q8N0S2 351 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 SLC22A18ASQ8N1D0 253 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 RNF10Q8N5U6 811 aaKnown RBP9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 PAF1Q8N7H5 531 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 CNTD1Q8N815 330 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 TP53I13Q8NBR0 393 aaPredicted RBP9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 ARRDC2Q8TBH0 407 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 PDCD6IPQ8WUM4 868 aaKnown RBP9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 ALG3Q92685 438 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 C1QTNF7Q9BXJ2 289 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 SLC32A1Q9H598 525 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 GRPEL1Q9HAV7 217 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 SAE1Q9UBE0 346 aaPredicted RBP9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 B4GALT6Q9UBX8 382 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 AMFRQ9UKV5 643 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 PHTF1Q9UMS5 762 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 EFR3BQ9Y2G0 817 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 COQ6Q9Y2Z9 468 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 PCDHB9Q9Y5E1 797 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 RAI2Q9Y5P3 530 aa9.03□□□□□ -0.96
LRTOMT-216ENST00000539271 FLRT2O43155 660 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 NEBLO76041 1014 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 MMP2P08253 660 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 PDHA1P08559 390 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 ELFN1P0C7U0 828 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 NFKBIAP25963 317 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 EPHA8P29322 1005 aaPredicted RBP9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 IGFALSP35858 605 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 RABIFP47224 123 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 ARRB1P49407 418 aaPredicted RBP9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 RWDD2BP57060 319 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 PFN3P60673 137 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 CCZ1BP86790 482 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 CCZ1P86791 482 aaPredicted RBP9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 IL9RQ01113 521 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 PDAP1Q13442 181 aaKnown RBP9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 WSCD2Q2TBF2 565 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 N4BP2L1Q5TBK1 243 aaPredicted RBP9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 LIPIQ6XZB0 460 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 PEX26Q7Z412 305 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 LRRC8AQ8IWT6 810 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 BAHD1Q8TBE0 780 aaPredicted RBP9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 SAP25Q8TEE9 199 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 SETD7Q8WTS6 366 aaKnown RBP9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 TFB1MQ8WVM0 346 aaKnown RBP9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 PIH1D2Q8WWB5 315 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 P3H4Q92791 437 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 IFT43Q96FT9 208 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 SCRN2Q96FV2 425 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 CAMK1GQ96NX5 476 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 MCCC1Q96RQ3 725 aaPredicted RBP9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 HERPUD2Q9BSE4 406 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 HEMGNQ9BXL5 484 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 TDRD1Q9BXT4 1180 aaKnown RBP9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 OSBPL8Q9BZF1 889 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 TSGA10Q9BZW7 698 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 MBNL1Q9NR56 388 aaKnown RBP9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 PCOLCE2Q9UKZ9 415 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 BTBD3Q9Y2F9 522 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 PPIL1Q9Y3C6 166 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 TTLL3Q9Y4R7 772 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 CAPN6Q9Y6Q1 641 aa9.02□□□□□ -0.97
LRTOMT-216ENST00000539271 ASXL3Q9C0F0 2248 aa9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 COL5A1P20908 1838 aaPredicted RBP9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 SPTY2D1-AS1A0A0U1RR47 76 aa9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 GOLGA6L3A6NEY3 463 aa9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 MIF4GDA9UHW6 222 aaKnown RBP9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 HACD1B0YJ81 288 aa9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 APOC4-APOC2K7ER74 178 aa9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 TOR1BO14657 336 aa9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 DDX3YO15523 660 aaKnown RBP9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 MTSS1O43312 755 aa9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 KRT86O43790 486 aa9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 LZTS3O60299 673 aaPredicted RBP9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 RECQL5O94762 991 aaPredicted RBP9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 HEXIM1O94992 359 aaKnown RBP9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 FTCDO95954 541 aa9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 PRLP01236 227 aa9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 APOC2P02655 101 aa9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 ADRB1P08588 477 aa9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 PYGMP11217 842 aa9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 CYP2A6P11509 494 aaPredicted RBP9.01□□□□□ -0.97
LRTOMT-216ENST00000539271 GM2AP17900 193 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms