RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 CLDN2P57739 230 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 FAM193AP78312 1265 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 SKOR1P84550 965 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 DSC2Q02487 901 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 WASHC5Q12768 1159 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 XRCC4Q13426 336 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 CDKN3Q16667 212 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 WSCD2Q2TBF2 565 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 UAP1L1Q3KQV9 507 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 TEX44Q53QW1 395 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 SLC45A4Q5BKX6 768 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 PPM1JQ5JR12 505 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 BZW1Q7L1Q6 419 aaKnown RBP13.78□□□□□ -0.2
CD9-208ENST00000538834 KIAA1328Q86T90 577 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 RAVER1Q8IY67 606 aaKnown RBP13.78□□□□□ -0.2
CD9-208ENST00000538834 TXLNBQ8N3L3 684 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 OXR1Q8N573 874 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 IMP4Q96G21 291 aaKnown RBP13.78□□□□□ -0.2
CD9-208ENST00000538834 TRIB3Q96RU7 358 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 TDRD1Q9BXT4 1180 aaKnown RBP13.78□□□□□ -0.2
CD9-208ENST00000538834 MAK16Q9BXY0 300 aaKnown RBP13.78□□□□□ -0.2
CD9-208ENST00000538834 GDF3Q9NR23 364 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 MBNL1Q9NR56 388 aaKnown RBP13.78□□□□□ -0.2
CD9-208ENST00000538834 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.78□□□□□ -0.2
CD9-208ENST00000538834 A6NNZ2 444 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 GOLGA6L6A8MZA4 724 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 MIF4GDA9UHW6 222 aaKnown RBP13.77□□□□□ -0.21
CD9-208ENST00000538834 APOC4-APOC2K7ER74 178 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 PPP1R12AO14974 1030 aaPredicted RBP13.77□□□□□ -0.21
CD9-208ENST00000538834 YKT6O15498 198 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 FLRT2O43155 660 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 APOC2P02655 101 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 PRKCGP05129 697 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 PYGMP11217 842 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 TPRP12270 2363 aaKnown RBP13.77□□□□□ -0.21
CD9-208ENST00000538834 TNNT1P13805 278 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 LHCGRP22888 699 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 PTPN3P26045 913 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 EPHA8P29322 1005 aaPredicted RBP13.77□□□□□ -0.21
CD9-208ENST00000538834 CD68P34810 354 aaPredicted RBP13.77□□□□□ -0.21
CD9-208ENST00000538834 TRIM23P36406 574 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 RABIFP47224 123 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 CCT8P50990 548 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 RWDD2BP57060 319 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 RPL26P61254 145 aaKnown RBP13.77□□□□□ -0.21
CD9-208ENST00000538834 YPEL5P62699 121 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 BPTFQ12830 3046 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 SGCGQ13326 291 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 KLF1Q13351 362 aaPredicted RBP13.77□□□□□ -0.21
CD9-208ENST00000538834 FZD2Q14332 565 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 NOMO1Q15155 1222 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 ZFYVE27Q5T4F4 411 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 N4BP2L1Q5TBK1 243 aaPredicted RBP13.77□□□□□ -0.21
CD9-208ENST00000538834 Q6ZSR6 202 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 ADAT2Q7Z6V5 191 aaKnown RBP13.77□□□□□ -0.21
CD9-208ENST00000538834 NLRP8Q86W28 1048 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 NAXDQ8IW45 347 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 KLHDC8BQ8IXV7 354 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 CCNYQ8ND76 341 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 DEFB124Q8NES8 71 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.77□□□□□ -0.21
CD9-208ENST00000538834 CXorf40AQ8TE69 158 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 TEKT5Q96M29 485 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 OSBPL8Q9BZF1 889 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 B4GALT6Q9UBX8 382 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 PNMA8BQ9ULN7 279 aaPredicted RBP13.77□□□□□ -0.21
CD9-208ENST00000538834 RPL26L1Q9UNX3 145 aaKnown RBP13.77□□□□□ -0.21
CD9-208ENST00000538834 BTBD3Q9Y2F9 522 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 PCDHB9Q9Y5E1 797 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 RAI2Q9Y5P3 530 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 AKAP13Q12802 2813 aa13.77□□□□□ -0.21
CD9-208ENST00000538834 A0A0J9YYE9 177 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 NPIPB15A6NHN6 443 aaPredicted RBP13.76□□□□□ -0.21
CD9-208ENST00000538834 HACD1B0YJ81 288 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 PSMD11O00231 422 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 FPGTO14772 594 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 HEXIM1O94992 359 aaKnown RBP13.76□□□□□ -0.21
CD9-208ENST00000538834 TRBC1P01850 177 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 HOXC4P09017 264 aaPredicted RBP13.76□□□□□ -0.21
CD9-208ENST00000538834 PMLP29590 882 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 BNIP3Q12983 259 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 CNGA3Q16281 694 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 PRAMEF14Q5SWL7 426 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 ARMC12Q5T9G4 340 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 AADACL2Q6P093 401 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 ERAP2Q6P179 960 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 KDM7AQ6ZMT4 941 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 TECPR1Q7Z6L1 1165 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 SYCE1Q8N0S2 351 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 P3H4Q92791 437 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 PDLIM2Q96JY6 352 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 ZNF830Q96NB3 372 aaPredicted RBP13.76□□□□□ -0.21
CD9-208ENST00000538834 CAMK1GQ96NX5 476 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 WRAP53Q9BUR4 548 aaKnown RBP13.76□□□□□ -0.21
CD9-208ENST00000538834 SLC25A51Q9H1U9 297 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 TOR4AQ9NXH8 423 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 KLF15Q9UIH9 416 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 AMFRQ9UKV5 643 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 COQ6Q9Y2Z9 468 aa13.76□□□□□ -0.21
CD9-208ENST00000538834 MACROD2A1Z1Q3 448 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms