RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 HDAC4P56524 1084 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 MTM1Q13496 603 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 HLTFQ14527 1009 aaKnown RBP eCLIP14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 TPD52L1Q16890 204 aaPredicted RBP14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 INO80DQ53TQ3 878 aaPredicted RBP14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 HSP90AA4PQ58FG1 418 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 TMEM164Q5U3C3 297 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 SPECC1LQ69YQ0 1117 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 SMYD5Q6GMV2 418 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 DPY19L2P1Q6NXN4 242 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 OGFOD3Q6PK18 319 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 PYROXD2Q8N2H3 581 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 RTL3Q8N8U3 475 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 RCBTB1Q8NDN9 531 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 EPS8L1Q8TE68 723 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 FAM172AQ8WUF8 416 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 SLC20A1Q8WUM9 679 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 CASKIN2Q8WXE0 1202 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 FUBP1Q96AE4 644 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 C11orf70Q9BRQ4 267 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 NDST4Q9H3R1 872 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 CYP4F12Q9HCS2 524 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 MOSPD1Q9UJG1 213 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 ATP8A1Q9Y2Q0 1164 aa14.09□□□□□ -0.15
SMARCA4-206ENST00000538456 TSPAN11A1L157 253 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 C2CD4BA6NLJ0 364 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 RASA4BC9J798 803 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 STMND1H3BQB6 276 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 PES1O00541 588 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 RASA4O43374 803 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 NUDT21O43809 227 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 CD82P27701 267 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 ALDH4A1P30038 563 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 MAZP56270 477 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 KIAA1024LP59773 190 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 SERINC3Q13530 473 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 CYTH1Q15438 398 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 CAMK4Q16566 473 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 BORAQ6PGQ7 559 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 STRADAQ7RTN6 431 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 PIM3Q86V86 326 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 ZSWIM9Q86XI8 627 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 DNAAF5Q86Y56 855 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 CAMK1DQ8IU85 385 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 LURAP1LQ8IV03 231 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 SLC30A5Q8TAD4 765 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 PMEPA1Q969W9 287 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 NUDT22Q9BRQ3 303 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 SUV39H2Q9H5I1 410 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 AKAP7Q9P0M2 348 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 ANKMY1Q9P2S6 941 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 SEPT3Q9UH03 358 aa14.08□□□□□ -0.16
SMARCA4-206ENST00000538456 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 F8VZ95 297 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 CREB3O43889 395 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 RECQL5O94762 991 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 CPNE6O95741 557 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 PTPN9P43378 593 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 POLE2P56282 527 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 OR1D5P58170 312 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 B4GALNT1Q00973 533 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 SKIDA1Q1XH10 827 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 VWA3BQ502W6 1294 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 EFHC2Q5JST6 749 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 MIIPQ5JXC2 388 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 KLHDC7AQ5VTJ3 777 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 BRAT1Q6PJG6 821 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 PAF1Q8N7H5 531 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 ZNF564Q8TBZ8 553 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 LGR4Q9BXB1 951 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 NAA15Q9BXJ9 866 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 SLC12A9Q9BXP2 914 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 EPN3Q9H201 632 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 KIAA1468Q9P260 1216 aa14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 UBA2Q9UBT2 640 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-206ENST00000538456 RHPN2P1A8MT19 583 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 A8MX80 341 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 B4GAT1O43505 415 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 BUB1BO60566 1050 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 ELFN1P0C7U0 828 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 LIFP15018 202 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 UCHL3P15374 230 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 MMP8P22894 467 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 KELP23276 732 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 ATP1A2P50993 1020 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 ARSDP51689 593 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 RALGDSQ12967 914 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 KCNAB2Q13303 367 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 GRM3Q14832 879 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 AGERQ15109 404 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 PARP15Q460N3 678 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 SCYL2Q6P3W7 929 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 SLFN11Q7Z7L1 901 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 IL22RA1Q8N6P7 574 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 KIAA1524Q8TCG1 905 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 HCAR2Q8TDS4 363 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 CENPIQ92674 756 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 NKD1Q969G9 470 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 NTAN1Q96AB6 310 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 CCDC74BQ96LY2 380 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms