RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 POLR1DQ9Y2S0 133 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 CCNDBP1O95273 360 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 PRAMEF1O95521 474 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 PAEPP09466 180 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 YWHAQP27348 245 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 CAMK2GQ13555 558 aaPredicted RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 DPYSL3Q14195 570 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF234Q14588 700 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 STILQ15468 1287 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 FBXO33Q7Z6M2 555 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 KATNAL2Q8IYT4 538 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 CLIP4Q8N3C7 705 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 LPCAT1Q8NF37 534 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 LRTOMTQ8WZ04 291 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 STARD8Q92502 1023 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 TP53INP1Q96A56 240 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 VMP1Q96GC9 406 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 SYNDIG1Q9H7V2 258 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 MAFFQ9ULX9 164 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 RRN3P2A6NIE6 340 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 RGL2O15211 777 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 NR2C2P49116 596 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 NELL1Q92832 810 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 CENPNQ96H22 339 aaPredicted RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 DDIT4Q9NX09 232 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 SH3PXD2BA1X283 911 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 MAGEB3O15480 346 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 PGLSO95336 258 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 ITGAVP06756 1048 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 IL27RAQ6UWB1 636 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 METTL6Q8TCB7 284 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 INPP4AQ96PE3 977 aaPredicted RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 METTL8Q9H825 291 aaKnown RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 PDGFCQ9NRA1 345 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 RAD18Q9NS91 495 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 IFT80Q9P2H3 777 aaPredicted RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 ANGPTL1O95841 491 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 UGT2B4P06133 528 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 IL1R1P14778 569 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 CYP11B2P19099 503 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 MXD1Q05195 221 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 SNAPC1Q16533 368 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 HM13Q8TCT9 377 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 MTMR12Q9C0I1 747 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 MAGEC1O60732 1142 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 RB1P06400 928 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 CELF6Q96J87 481 aaKnown RBP5.68□□□□□ -1.5
CSMD1-215ENST00000537824 XPR1Q9UBH6 696 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 ADGRE2Q9UHX3 823 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 FAM149AA5PLN7 773 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 HTR3EA5X5Y0 456 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 HDAC3O15379 428 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 EMC2Q15006 297 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 MOGQ16653 247 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 WDR59Q6PJI9 974 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 PM20D2Q8IYS1 436 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 COLGALT1Q8NBJ5 622 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 TMIEQ8NEW7 156 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 RP9Q8TA86 221 aaKnown RBP5.68□□□□□ -1.5
CSMD1-215ENST00000537824 ACMSDQ8TDX5 336 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 CNOT6Q9ULM6 557 aaKnown RBP5.68□□□□□ -1.5
CSMD1-215ENST00000537824 LRRK1Q38SD2 2015 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 A0A1B0GVG6 124 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 KCNA10Q16322 511 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 WDR45BQ5MNZ6 344 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 TRIM40Q6P9F5 258 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 SPPL2CQ8IUH8 684 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 MCOLN2Q8IZK6 566 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 URGCPQ8TCY9 931 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 RASSF1Q9NS23 344 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 RPS6KB2Q9UBS0 482 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 SLC37A4O43826 429 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 LINC00032P0C843 101 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 PHKG2P15735 406 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 NT5DC1Q5TFE4 455 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 USP43Q70EL4 1123 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 COMMD7Q86VX2 200 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 TEX47Q8TBZ9 253 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 MRPL45Q9BRJ2 306 aaKnown RBP5.68□□□□□ -1.5
CSMD1-215ENST00000537824 MUC13Q9H3R2 512 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 TAS2R14Q9NYV8 317 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 PTBP2Q9UKA9 531 aaKnown RBP5.68□□□□□ -1.5
CSMD1-215ENST00000537824 ST3GAL5Q9UNP4 418 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 IRAK3Q9Y616 596 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 ALG5Q9Y673 324 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 GRIN2DO15399 1336 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 UGT2B11O75310 529 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 UGT2B15P54855 530 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 SMIM11AP58511 58 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 PRKCEQ02156 737 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 RAB12Q6IQ22 244 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 PYHIN1Q6K0P9 492 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 MILR1Q7Z6M3 343 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 TIGD4Q8IY51 512 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 OR52K2Q8NGK3 314 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 TLCD1Q96CP7 247 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 CD320Q9NPF0 282 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 SNTG1Q9NSN8 517 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 IGSF9Q9P2J2 1179 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 ADAM28Q9UKQ2 775 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms