RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 NSUN2Q08J23 767 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRIM25-202ENST00000537230 TAF10Q12962 218 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 NADK2Q4G0N4 442 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 CTXN3Q4LDR2 81 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 FSCBQ5H9T9 825 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 MARC1Q5VT66 337 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 MSANTD2Q6P1R3 559 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 TRIM74Q86UV6 250 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 TRIM73Q86UV7 250 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 MARVELD2Q8N4S9 558 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 KDM1BQ8NB78 822 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 RDH11Q8TC12 318 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 DGCR14Q96DF8 476 aaKnown RBP12.94□□□□□ -0.34
TRIM25-202ENST00000537230 CDRT15Q96T59 188 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 GRIP2Q9C0E4 1043 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 ATP13A1Q9HD20 1204 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 ATXN10Q9UBB4 475 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 UXTQ9UBK9 157 aaPredicted RBP12.94□□□□□ -0.34
TRIM25-202ENST00000537230 STK39Q9UEW8 545 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 ABT1Q9ULW3 272 aaKnown RBP12.94□□□□□ -0.34
TRIM25-202ENST00000537230 LZTS1Q9Y250 596 aa12.94□□□□□ -0.34
TRIM25-202ENST00000537230 WASH4PA8MWX3 477 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 CFLARO15519 480 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 AP1G1O43747 822 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 APOA4P06727 396 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 PIRTP0C851 137 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 XRCC1P18887 633 aaPredicted RBP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 PIK3R1P27986 724 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 CST5P28325 142 aaPredicted RBP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 SERPINH1P50454 418 aaKnown RBP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 NRG1Q02297 640 aaPredicted RBP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 MAP7Q14244 749 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 IYDQ6PHW0 289 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 DCP1BQ8IZD4 617 aaKnown RBP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 SREK1Q8WXA9 508 aaKnown RBP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 USP13Q92995 863 aaPredicted RBP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 C8orf48Q96LL4 319 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 POMKQ9H5K3 350 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 CCSER2Q9H7U1 834 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 DDX18Q9NVP1 670 aaKnown RBP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 AP4B1Q9Y6B7 739 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 AK5Q9Y6K8 562 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 CRTAMO95727 393 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 ASLP04424 464 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 RPLP2P05387 115 aaKnown RBP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 RHOQP17081 205 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 RPL5P46777 297 aaKnown RBP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 RENBPP51606 427 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 FLOT2Q14254 428 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 SIRPB2Q5JXA9 342 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 C10orf120Q5SQS8 335 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 NXNQ6DKJ4 435 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 TMEM207Q6UWW9 146 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 PIM3Q86V86 326 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 TMEM173Q86WV6 379 aaPredicted RBP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 CFAP52Q8N1V2 620 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 PCSK9Q8NBP7 692 aaKnown RBP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 ARRDC2Q8TBH0 407 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 PTCD2Q8WV60 388 aaKnown RBP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 FBXO32Q969P5 355 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 MRPL46Q9H2W6 279 aaKnown RBP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 COPS7BQ9H9Q2 264 aaPredicted RBP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 SP110Q9HB58 689 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 ARNT2Q9HBZ2 717 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 MRM3Q9HC36 420 aaKnown RBP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 PREBQ9HCU5 417 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRIM25-202ENST00000537230 TMEM248Q9NWD8 314 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 PCDHB5Q9Y5E4 795 aa12.93□□□□□ -0.34
TRIM25-202ENST00000537230 DENRO43583 198 aaKnown RBP12.92□□□□□ -0.34
TRIM25-202ENST00000537230 H2AFYO75367 372 aaKnown RBP12.92□□□□□ -0.34
TRIM25-202ENST00000537230 EOMESO95936 686 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 KCNC1P48547 511 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 MS4A2Q01362 244 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 PRKAA1Q13131 559 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 NFE2Q16621 373 aaPredicted RBP12.92□□□□□ -0.34
TRIM25-202ENST00000537230 C1QTNF12Q5T7M4 302 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 KLHDC10Q6PID8 442 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 TRIM67Q6ZTA4 783 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 CCDC117Q8IWD4 279 aaPredicted RBP12.92□□□□□ -0.34
TRIM25-202ENST00000537230 DSELQ8IZU8 1212 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 LILRA2Q8N149 483 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 GALNT4Q8N4A0 578 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 OR6P1Q8NGX9 317 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 PIP4K2CQ8TBX8 421 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 HDAC10Q969S8 669 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 FUBP3Q96I24 572 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRIM25-202ENST00000537230 LRGUKQ96M69 825 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 RPRD1AQ96P16 312 aaPredicted RBP12.92□□□□□ -0.34
TRIM25-202ENST00000537230 PRPF18Q99633 342 aaKnown RBP12.92□□□□□ -0.34
TRIM25-202ENST00000537230 SEPT5Q99719 369 aaPredicted RBP12.92□□□□□ -0.34
TRIM25-202ENST00000537230 FBXO44Q9H4M3 255 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 MARCH2Q9P0N8 246 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 C6orf203Q9P0P8 240 aaPredicted RBP12.92□□□□□ -0.34
TRIM25-202ENST00000537230 IGLV3-10A0A075B6K4 115 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 HEATR9A2RTY3 570 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 STX16-NPEPL1H3BU86 382 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 CCDC166P0CW27 439 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 COL6A2P12110 1019 aa12.92□□□□□ -0.34
TRIM25-202ENST00000537230 YWHAQP27348 245 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms