RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 PHC2Q8IXK0 858 aa9.53□□□□□ -0.88
CPSF7-217ENST00000537162 ANKRD52Q8NB46 1076 aa9.53□□□□□ -0.88
CPSF7-217ENST00000537162 PLA2G15Q8NCC3 412 aa9.53□□□□□ -0.88
CPSF7-217ENST00000537162 OR6K2Q8NGY2 324 aa9.53□□□□□ -0.88
CPSF7-217ENST00000537162 KIAA1524Q8TCG1 905 aa9.53□□□□□ -0.88
CPSF7-217ENST00000537162 ADAMTS17Q8TE56 1095 aa9.53□□□□□ -0.88
CPSF7-217ENST00000537162 DQX1Q8TE96 717 aaKnown RBP9.53□□□□□ -0.88
CPSF7-217ENST00000537162 MS4A3Q96HJ5 214 aa9.53□□□□□ -0.88
CPSF7-217ENST00000537162 ZMYND15Q9H091 742 aa9.53□□□□□ -0.88
CPSF7-217ENST00000537162 ZDHHC6Q9H6R6 413 aa9.53□□□□□ -0.88
CPSF7-217ENST00000537162 SUDS3Q9H7L9 328 aaPredicted RBP9.53□□□□□ -0.88
CPSF7-217ENST00000537162 LRRC4Q9HBW1 653 aa9.53□□□□□ -0.88
CPSF7-217ENST00000537162 ZBTB20Q9HC78 741 aaPredicted RBP9.53□□□□□ -0.88
CPSF7-217ENST00000537162 LHX9Q9NQ69 397 aa9.53□□□□□ -0.88
CPSF7-217ENST00000537162 AGPAT3Q9NRZ7 376 aa9.53□□□□□ -0.88
CPSF7-217ENST00000537162 CCM2LQ9NUG4 571 aaPredicted RBP9.53□□□□□ -0.88
CPSF7-217ENST00000537162 TLR6Q9Y2C9 796 aa9.53□□□□□ -0.88
CPSF7-217ENST00000537162 PLEKHM1Q9Y4G2 1056 aa9.53□□□□□ -0.88
CPSF7-217ENST00000537162 ACTL7AQ9Y615 435 aa9.53□□□□□ -0.88
CPSF7-217ENST00000537162 SSU72P8A0A1W2PR75 194 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 FRMD3A2A2Y4 597 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 F5H5T6 163 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 XPO1O14980 1071 aaKnown RBP9.52□□□□□ -0.89
CPSF7-217ENST00000537162 NDUFA10O95299 355 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 TIAF1O95411 115 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 AK4P27144 223 aaPredicted RBP9.52□□□□□ -0.89
CPSF7-217ENST00000537162 PTPN4P29074 926 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 GARSP41250 739 aaKnown RBP9.52□□□□□ -0.89
CPSF7-217ENST00000537162 CCNHP51946 323 aaPredicted RBP9.52□□□□□ -0.89
CPSF7-217ENST00000537162 SH3BP2P78314 561 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 NUCB2P80303 420 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 ALCAMQ13740 583 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 LRRC14Q15048 493 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 GOLGA7BQ2TAP0 167 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 ZC3H12AQ5D1E8 599 aaKnown RBP9.52□□□□□ -0.89
CPSF7-217ENST00000537162 PLEKHA7Q6IQ23 1121 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 ZNF765Q7L2R6 523 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 TAC4Q86UU9 113 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 SLC4A11Q8NBS3 891 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 OR56A4Q8NGH8 313 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 UBA3Q8TBC4 463 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 DPYSL5Q9BPU6 564 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 HEPHQ9BQS7 1158 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 TAAR2Q9P1P5 351 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 LNPEPQ9UIQ6 1025 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 PADI1Q9ULC6 663 aa9.52□□□□□ -0.89
CPSF7-217ENST00000537162 C21orf140B9A014 251 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 EIF3DO15371 548 aaKnown RBP eCLIP9.51□□□□□ -0.89
CPSF7-217ENST00000537162 TMEM63AO94886 807 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 FUCA1P04066 466 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 PCCBP05166 539 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 CCNB1P14635 433 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 PCSK6P29122 969 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 GGCXP38435 758 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 DNA2P51530 1060 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 NDST2P52849 883 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 RAD23BP54727 409 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 ADAM8P78325 824 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 CSNK1G2P78368 415 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 CLDN10P78369 228 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 ARHGAP17Q68EM7 881 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 FBXL22Q6P050 247 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 Q6ZS92 163 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 SYVN1Q86TM6 617 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 SIX6OS1Q8N1H7 587 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 XXYLT1Q8NBI6 393 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 RASSF8Q8NHQ8 419 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 PARD3BQ8TEW8 1205 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 PTCD2Q8WV60 388 aaKnown RBP9.51□□□□□ -0.89
CPSF7-217ENST00000537162 RAB7BQ96AH8 199 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 LGR4Q9BXB1 951 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 BRD8Q9H0E9 1235 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 MUC3BQ9H195 1237 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 PANK4Q9NVE7 773 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 CACNA1CQ13936 2221 aa9.51□□□□□ -0.89
CPSF7-217ENST00000537162 NCOA6Q14686 2063 aaPredicted RBP9.51□□□□□ -0.89
CPSF7-217ENST00000537162 TRBV23OR9-2A0A075B6M9 112 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 A0A0D9SEW6 157 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 CCL21O00585 134 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 ZW10O43264 779 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 HLA-DRAP01903 254 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 LTFP02788 710 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 CCNYL3P0C7X3 344 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 TRIM21P19474 475 aaKnown RBP9.5□□□□□ -0.89
CPSF7-217ENST00000537162 LPOP22079 712 aaPredicted RBP9.5□□□□□ -0.89
CPSF7-217ENST00000537162 PPM1FP49593 454 aaPredicted RBP9.5□□□□□ -0.89
CPSF7-217ENST00000537162 RGS7P49802 495 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 PITX1P78337 314 aaPredicted RBP9.5□□□□□ -0.89
CPSF7-217ENST00000537162 ADORA2A-AS1P86434 159 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 BIRC2Q13490 618 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 CEBPEQ15744 281 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 KYNUQ16719 465 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 ZACNQ401N2 412 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 CARD16Q5EG05 197 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 EFHC1Q5JVL4 640 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 VWA5B1Q5TIE3 1220 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 LYPLAL1Q5VWZ2 237 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 SYPL2Q5VXT5 272 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 SLC30A9Q6PML9 568 aa9.5□□□□□ -0.89
CPSF7-217ENST00000537162 CLEC9AQ6UXN8 241 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms