RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 EBNA1BP2Q99848 306 aaKnown RBP8.28□□□□□ -1.08
ABCA4-207ENST00000536513 FAM192AQ9GZU8 254 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 RRN3Q9NYV6 651 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 LMCD1Q9NZU5 365 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 SLCO3A1Q9UIG8 710 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 APPL1Q9UKG1 709 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 BCLAF3A2AJT9 711 aaKnown RBP8.27□□□□□ -1.09
ABCA4-207ENST00000536513 H0YGN5 161 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 PIGNO95427 931 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 RHOP08100 348 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 CD68P34810 354 aaPredicted RBP8.27□□□□□ -1.09
ABCA4-207ENST00000536513 FDFT1P37268 417 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 PPIDQ08752 370 aaKnown RBP8.27□□□□□ -1.09
ABCA4-207ENST00000536513 DPYSQ14117 519 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 CSHL1Q14406 222 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 SLC1A5Q15758 541 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 BRMS1LQ5PSV4 323 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 NADSYN1Q6IA69 706 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 RPS27LQ71UM5 84 aaKnown RBP8.27□□□□□ -1.09
ABCA4-207ENST00000536513 DET1Q7L5Y6 550 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 TMEM25Q86YD3 366 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 NUDCD3Q8IVD9 361 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 APCDD1Q8J025 514 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 DCBLD1Q8N8Z6 715 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.27□□□□□ -1.09
ABCA4-207ENST00000536513 WFDC5Q8TCV5 224 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 PPP4R1Q8TF05 950 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 THAP11Q96EK4 314 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 SERAC1Q96JX3 654 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 CNBD2Q96M20 576 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 TEKT5Q96M29 485 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 OLA1Q9NTK5 396 aaKnown RBP8.27□□□□□ -1.09
ABCA4-207ENST00000536513 NFS1Q9Y697 457 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 USP3Q9Y6I4 520 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 EP300Q09472 2414 aaPredicted RBP8.27□□□□□ -1.09
ABCA4-207ENST00000536513 H3BQ06 376 aaPredicted RBP8.27□□□□□ -1.09
ABCA4-207ENST00000536513 TPP1O14773 563 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 TP73O15350 636 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 USP1O94782 785 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 VNN2O95498 520 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 HLA-EP13747 358 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 DNAJB1P25685 340 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 PCYT1AP49585 367 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 CDH17Q12864 832 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 LBRQ14739 615 aaKnown RBP8.27□□□□□ -1.09
ABCA4-207ENST00000536513 C16orf72Q14CZ0 275 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 NANOGNBQ7Z5D8 188 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 ZBTB46Q86UZ6 589 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 TLCD1Q96CP7 247 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 HTATIP2Q9BUP3 242 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 MRGBPQ9NV56 204 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 RABGEF1Q9UJ41 708 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 COL6A3P12111 3177 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 TBC1D3BA6NDS4 549 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 ANTXRLA6NF34 631 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 NDC80O14777 642 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 AURKAO14965 403 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 CHADO15335 359 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 PEX11AO75192 247 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 ANXA9O76027 345 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 UGT2B4P06133 528 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 SNRPAP09012 282 aaKnown RBP8.27□□□□□ -1.09
ABCA4-207ENST00000536513 CHRM3P20309 590 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 BMPR1AP36894 532 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 MAGEA10P43363 369 aaPredicted RBP8.27□□□□□ -1.09
ABCA4-207ENST00000536513 RGRP47804 291 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 MPP3Q13368 585 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 LY6G5CQ5SRR4 150 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 KLC3Q6P597 504 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 BHLHA9Q7RTU4 235 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 CRLF3Q8IUI8 442 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 SLC41A1Q8IVJ1 513 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 PYDC1Q8WXC3 89 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 IRGQQ8WZA9 623 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 KCNN1Q92952 543 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 ESAMQ96AP7 390 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 VMP1Q96GC9 406 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 BTBD10Q9BSF8 475 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 MLPHQ9BV36 600 aaPredicted RBP8.27□□□□□ -1.09
ABCA4-207ENST00000536513 SLC46A2Q9BY10 475 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 LRRC40Q9H9A6 602 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 ARHGEF38Q9NXL2 777 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 DOLKQ9UPQ8 538 aa8.27□□□□□ -1.09
ABCA4-207ENST00000536513 RUVBL2Q9Y230 463 aaKnown RBP8.27□□□□□ -1.09
ABCA4-207ENST00000536513 WASH3PC4AMC7 463 aa8.26□□□□□ -1.09
ABCA4-207ENST00000536513 SMAD6O43541 496 aaKnown RBP8.26□□□□□ -1.09
ABCA4-207ENST00000536513 MTX2O75431 263 aa8.26□□□□□ -1.09
ABCA4-207ENST00000536513 LYNP07948 512 aa8.26□□□□□ -1.09
ABCA4-207ENST00000536513 NUDT17P0C025 328 aa8.26□□□□□ -1.09
ABCA4-207ENST00000536513 CCR2P41597 374 aa8.26□□□□□ -1.09
ABCA4-207ENST00000536513 CTSOP43234 321 aaPredicted RBP8.26□□□□□ -1.09
ABCA4-207ENST00000536513 TPD52P55327 224 aaPredicted RBP8.26□□□□□ -1.09
ABCA4-207ENST00000536513 NR1H3Q13133 447 aa8.26□□□□□ -1.09
ABCA4-207ENST00000536513 CHI3L2Q15782 390 aa8.26□□□□□ -1.09
ABCA4-207ENST00000536513 ARHGAP15Q53QZ3 475 aa8.26□□□□□ -1.09
ABCA4-207ENST00000536513 ADGRF1Q5T601 910 aa8.26□□□□□ -1.09
ABCA4-207ENST00000536513 MARK2Q7KZI7 788 aaKnown RBP8.26□□□□□ -1.09
ABCA4-207ENST00000536513 ADGRD2Q7Z7M1 963 aa8.26□□□□□ -1.09
ABCA4-207ENST00000536513 SLC26A11Q86WA9 606 aa8.26□□□□□ -1.09
ABCA4-207ENST00000536513 SCUBE1Q8IWY4 988 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms