RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 EIF2B3Q9NR50 452 aaKnown RBP11.71□□□□□ -0.53
CHRNB1-202ENST00000536404 MRGBPQ9NV56 204 aa11.71□□□□□ -0.53
CHRNB1-202ENST00000536404 ARHGEF38Q9NXL2 777 aa11.71□□□□□ -0.53
CHRNB1-202ENST00000536404 MOCS1Q9NZB8 636 aa11.71□□□□□ -0.53
CHRNB1-202ENST00000536404 TXNDC16Q9P2K2 825 aa11.71□□□□□ -0.53
CHRNB1-202ENST00000536404 NXF1Q9UBU9 619 aaKnown RBP11.71□□□□□ -0.53
CHRNB1-202ENST00000536404 PPM1HQ9ULR3 514 aa11.71□□□□□ -0.53
CHRNB1-202ENST00000536404 DMTF1Q9Y222 760 aa11.71□□□□□ -0.53
CHRNB1-202ENST00000536404 GOLGA8QA0A0J9YX86 632 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 GOLGA8OA6NCC3 632 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 CXorf49A8MYA2 514 aaPredicted RBP11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 KPNA7A9QM74 516 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 TMEM114B3SHH9 223 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 GOLGA8NF8WBI6 632 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 SIN3BO75182 1162 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 CILPO75339 1184 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 SERPINB7O75635 380 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 PIAS1O75925 651 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 CYP11A1P05108 521 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 CSH1P0DML2 217 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 CSH2P0DML3 217 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 RBL1P28749 1068 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 GDI1P31150 447 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 SDC4P31431 198 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 SERPINB6P35237 376 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 GPD2P43304 727 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 ALDH1A3P47895 512 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 PRKAA2P54646 552 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 PLD1Q13393 1074 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 SEMA5AQ13591 1074 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 SEPT6Q14141 434 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 CCDC14Q49A88 953 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 HSF5Q4G112 596 aaPredicted RBP11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 SLC39A12Q504Y0 691 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 MDH1BQ5I0G3 518 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 TEDDM1Q5T9Z0 273 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 MROH9Q5TGP6 573 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 PDPK2PQ6A1A2 396 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 OR6B2Q6IFH4 312 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 BORAQ6PGQ7 559 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 NPNTQ6UXI9 565 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 ZNF852Q6ZMS4 543 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 RFX8Q6ZV50 586 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 DNAJB7Q7Z6W7 309 aaPredicted RBP11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 LEMD2Q8NC56 503 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 DDI1Q8WTU0 396 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 GAB3Q8WWW8 586 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 DNAI2Q9GZS0 605 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 EBF3Q9H4W6 596 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 TRPV4Q9HBA0 871 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 HACD3Q9P035 362 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 MARCOQ9UEW3 520 aaPredicted RBP11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 RAB26Q9ULW5 256 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 ZNF711Q9Y462 761 aa11.71□□□□□ -0.54
CHRNB1-202ENST00000536404 SH3PXD2BA1X283 911 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 HEPACAM2A8MVW5 462 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 DENRO43583 198 aaKnown RBP11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 PLIN3O60664 434 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 AVILO75366 819 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 STAU1O95793 577 aaKnown RBP11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 APOA4P06727 396 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 KRT19P08727 400 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 THRAP10827 490 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 FGF3P11487 239 aaPredicted RBP11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 PSMC3P17980 439 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 PGAM1P18669 254 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 RPL5P46777 297 aaKnown RBP11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 HARS2P49590 506 aaKnown RBP11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 TMED10P49755 219 aaKnown RBP11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 TAF6P49848 677 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 ABCE1P61221 599 aaKnown RBP11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 CSTF1Q05048 431 aaKnown RBP11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 MMRN1Q13201 1228 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 TUBB3Q13509 450 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 BMPR2Q13873 1038 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 UBAP2LQ14157 1087 aaKnown RBP11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 PDK3Q15120 406 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 FAXCQ5TGI0 409 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 WSCD1Q658N2 575 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 LCLAT1Q6UWP7 414 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 RAPH1Q70E73 1250 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 GAREM2Q75VX8 874 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 LRRTM3Q86VH5 581 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 MARVELD2Q8N4S9 558 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 DLG3Q92796 817 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 DNASE1L2Q92874 299 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 CLDN23Q96B33 292 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 CLPTM1LQ96KA5 538 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 LPIN3Q9BQK8 851 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 SMYD3Q9H7B4 428 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 PLGRKTQ9HBL7 147 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 MRPL40Q9NQ50 206 aaKnown RBP11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 CYTH4Q9UIA0 394 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 NDRG2Q9UN36 371 aaKnown RBP11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 PSMD13Q9UNM6 376 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 FAF1Q9UNN5 650 aaPredicted RBP11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 TSC22D4Q9Y3Q8 395 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 DTNAQ9Y4J8 743 aa11.7□□□□□ -0.54
CHRNB1-202ENST00000536404 GPR179Q6PRD1 2367 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms