RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 ALG1LQ6GMV1 187 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 UNQ6494/PRO21346Q6UXR6 183 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 LIPIQ6XZB0 460 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 PARGQ86W56 976 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 PLA2G15Q8NCC3 412 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 RNF157Q96PX1 679 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 NT5MQ9NPB1 228 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 DNAJC28Q9NX36 388 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 B4GALT6Q9UBX8 382 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 LCMT1Q9UIC8 334 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 APOBEC2Q9Y235 224 aaKnown RBP16.48■□□□□ 0.23
ATL3-202ENST00000535789 MSRB2Q9Y3D2 182 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 U3KQA8 63 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 KIF26BQ2KJY2 2108 aa16.48■□□□□ 0.23
ATL3-202ENST00000535789 A0A0U1RQS6 177 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 SIGLEC6O43699 453 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 NEBLO76041 1014 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 KRT1P04264 644 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 CAPNS1P04632 268 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 HLA-DQB2P05538 268 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 COMTP21964 271 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 LHCGRP22888 699 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 XPAP23025 273 aaPredicted RBP16.47■□□□□ 0.23
ATL3-202ENST00000535789 HSPA9P38646 679 aaKnown RBP16.47■□□□□ 0.23
ATL3-202ENST00000535789 RENBPP51606 427 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 HADHBP55084 474 aaKnown RBP16.47■□□□□ 0.23
ATL3-202ENST00000535789 DSC2Q02487 901 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 INAVAQ3KP66 663 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 MARC1Q5VT66 337 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 NPNTQ6UXI9 565 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 ACRBPQ8NEB7 543 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 ZNF548Q8NEK5 533 aaPredicted RBP16.47■□□□□ 0.23
ATL3-202ENST00000535789 FAM174AQ8TBP5 190 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 HDAC11Q96DB2 347 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 IFT43Q96FT9 208 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 TSGA13Q96PP4 275 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 SCUBE2Q9NQ36 999 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 ZKSCAN5Q9Y2L8 839 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 ZNF106Q9H2Y7 1883 aaKnown RBP16.47■□□□□ 0.23
ATL3-202ENST00000535789 KNTC1P50748 2209 aa16.47■□□□□ 0.23
ATL3-202ENST00000535789 DSPP15924 2871 aaKnown RBP16.47■□□□□ 0.23
ATL3-202ENST00000535789 ANKRD11Q6UB99 2663 aaPredicted RBP16.46■□□□□ 0.23
ATL3-202ENST00000535789 NPIPB15A6NHN6 443 aaPredicted RBP16.46■□□□□ 0.23
ATL3-202ENST00000535789 A8MX80 341 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 ZNF487B1APH4 448 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 FFAR2O15552 330 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 FZD6O60353 706 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 SOCS5O75159 536 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 LDOC1O95751 146 aaPredicted RBP16.46■□□□□ 0.23
ATL3-202ENST00000535789 CPP00450 1065 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 CSF2P04141 144 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 PDHA1P08559 390 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 MYF5P13349 255 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 MAGEA1P43355 309 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 ADCY2Q08462 1091 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 NIPAL4Q0D2K0 466 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 ZBTB17Q13105 803 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 CNGA3Q16281 694 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 IFI16Q16666 785 aaKnown RBP16.46■□□□□ 0.23
ATL3-202ENST00000535789 CCDC157Q569K6 752 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 CFAP58Q5T655 872 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 ERAP2Q6P179 960 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 DHRS13Q6UX07 377 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 MFSD7Q6UXD7 560 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 TMPRSS7Q7RTY8 843 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 OR4C6Q8NH72 309 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 ARRDC2Q8TBH0 407 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 FATE1Q969F0 183 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 OLFM3Q96PB7 478 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 LGMNQ99538 433 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 DESI2Q9BSY9 194 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 PCDHA13Q9Y5I0 950 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 ADGRG1Q9Y653 693 aa16.46■□□□□ 0.23
ATL3-202ENST00000535789 APC2O95996 2303 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.45■□□□□ 0.22
ATL3-202ENST00000535789 K7ESM1 405 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 MATN3O15232 486 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 RECQL5O94762 991 aaPredicted RBP16.45■□□□□ 0.22
ATL3-202ENST00000535789 PGLSO95336 258 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 CELA2BP08218 269 aaPredicted RBP16.45■□□□□ 0.22
ATL3-202ENST00000535789 CCNCP24863 283 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 PPIDQ08752 370 aaKnown RBP16.45■□□□□ 0.22
ATL3-202ENST00000535789 LRRC14Q15048 493 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 TAZQ16635 292 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 LRRC38Q5VT99 294 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 MACC1Q6ZN28 852 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 B4GALNT4Q76KP1 1039 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 TSPAN33Q86UF1 283 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 VSIG1Q86XK7 387 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 DCP2Q8IU60 420 aaKnown RBP16.45■□□□□ 0.22
ATL3-202ENST00000535789 LRRC49Q8IUZ0 686 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 PDCD6IPQ8WUM4 868 aaKnown RBP16.45■□□□□ 0.22
ATL3-202ENST00000535789 PIH1D2Q8WWB5 315 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 RNF25Q96BH1 459 aaPredicted RBP16.45■□□□□ 0.22
ATL3-202ENST00000535789 COQ10AQ96MF6 247 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 MCCC1Q96RQ3 725 aaPredicted RBP16.45■□□□□ 0.22
ATL3-202ENST00000535789 SEMA3CQ99985 751 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 LRRC61Q9BV99 259 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 OR1A2Q9Y585 309 aa16.45■□□□□ 0.22
ATL3-202ENST00000535789 PKD1L2Q7Z442 2459 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms