RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 RPL26P61254 145 aaKnown RBP12.12□□□□□ -0.47
CHD4-203ENST00000535717 CDK18Q07002 472 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 RALGDSQ12967 914 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 FGL2Q14314 439 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 CCDC6Q16204 474 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 CYP1B1Q16678 543 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 PARP6Q2NL67 630 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 P3H1Q32P28 736 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 PEAR1Q5VY43 1037 aaPredicted RBP12.12□□□□□ -0.47
CHD4-203ENST00000535717 TTC27Q6P3X3 843 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 ARHGEF18Q6ZSZ5 1173 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 DPPA4Q7L190 304 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 PRUNE1Q86TP1 453 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 SYT12Q8IV01 421 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 C12orf50Q8NA57 414 aaPredicted RBP12.12□□□□□ -0.47
CHD4-203ENST00000535717 GLIS1Q8NBF1 620 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 LPCAT1Q8NF37 534 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 MAGOHBQ96A72 148 aaKnown RBP12.12□□□□□ -0.47
CHD4-203ENST00000535717 SCRN2Q96FV2 425 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 MRGPRX2Q96LB1 330 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 MLPHQ9BV36 600 aaPredicted RBP12.12□□□□□ -0.47
CHD4-203ENST00000535717 C1QTNF2Q9BXJ5 285 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 MIR1-1HGQ9H1L0 117 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 VPS45Q9NRW7 570 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 B4GALT6Q9UBX8 382 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 GMEB2Q9UKD1 530 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 RPL26L1Q9UNX3 145 aaKnown RBP12.12□□□□□ -0.47
CHD4-203ENST00000535717 PCDHGA5Q9Y5G8 931 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 TRPM6Q9BX84 2022 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 A0A0J9YYE9 177 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 A0A0U1RQS6 177 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 LOC285095A0A1B0GVY8 99 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 ANKRD66B4E2M5 251 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 PDE2AO00408 941 aaPredicted RBP12.11□□□□□ -0.47
CHD4-203ENST00000535717 WNT9AO14904 365 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 SLC31A1O15431 190 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 ANXA9O76027 345 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 NDST3O95803 873 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 TRBC1P01850 177 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 VIPR1P32241 457 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 HNF1BP35680 557 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 MPLP40238 635 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 EPHB1P54762 984 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 GEMP55040 296 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 MPP3Q13368 585 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 GALNT3Q14435 633 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 PRPSAP1Q14558 356 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 QPCTQ16769 361 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 SETMARQ53H47 684 aaPredicted RBP12.11□□□□□ -0.47
CHD4-203ENST00000535717 PLA2G2CQ5R387 149 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 LIPIQ6XZB0 460 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 USP45Q70EL2 814 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 KLHDC8BQ8IXV7 354 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 ZCCHC9Q8N567 271 aaKnown RBP12.11□□□□□ -0.47
CHD4-203ENST00000535717 DCLK2Q8N568 766 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 TAB3Q8N5C8 712 aaPredicted RBP12.11□□□□□ -0.47
CHD4-203ENST00000535717 CCDC89Q8N998 374 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 IPMKQ8NFU5 416 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 CXorf40AQ8TE69 158 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 RUBCNQ92622 972 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 IFT43Q96FT9 208 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 ADGRE3Q9BY15 652 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 SLC17A9Q9BYT1 436 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 NCDNQ9UBB6 729 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 TPX2Q9ULW0 747 aaKnown RBP12.11□□□□□ -0.47
CHD4-203ENST00000535717 GVINP1Q7Z2Y8 2422 aa12.11□□□□□ -0.47
CHD4-203ENST00000535717 PIEZO1Q92508 2521 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 CAPN8A6NHC0 703 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 PHF2O75151 1096 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 PAK4O96013 591 aaPredicted RBP12.1□□□□□ -0.47
CHD4-203ENST00000535717 EPOP01588 193 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 ATXN1LP0C7T5 689 aaKnown RBP12.1□□□□□ -0.47
CHD4-203ENST00000535717 ZSCAN5DPP0CG00 497 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 CYP2A6P11509 494 aaPredicted RBP12.1□□□□□ -0.47
CHD4-203ENST00000535717 C6P13671 934 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 LHCGRP22888 699 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 RPL22P35268 128 aaKnown RBP12.1□□□□□ -0.47
CHD4-203ENST00000535717 ADRA1AP35348 466 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 HOXD12P35452 270 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 NUDT1P36639 197 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 COILP38432 576 aaPredicted RBP12.1□□□□□ -0.47
CHD4-203ENST00000535717 DPP6P42658 865 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 GRIA4P48058 902 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 SGCGQ13326 291 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 CNGA3Q16281 694 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 KCTD19Q17RG1 926 aaPredicted RBP12.1□□□□□ -0.47
CHD4-203ENST00000535717 FAXCQ5TGI0 409 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 CRTC1Q6UUV9 634 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 GSTA5Q7RTV2 222 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 TSPAN33Q86UF1 283 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 NDUFAF2Q8N183 169 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 CBARPQ8N350 705 aaPredicted RBP12.1□□□□□ -0.47
CHD4-203ENST00000535717 ATL2Q8NHH9 583 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 RMDN1Q96DB5 314 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 SERAC1Q96JX3 654 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 SLC6A18Q96N87 628 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 FICDQ9BVA6 458 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 SMOC1Q9H4F8 434 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 TM9SF3Q9HD45 589 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 DMTF1Q9Y222 760 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms