RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 KCTD11Q693B1 232 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 SDE2Q6IQ49 451 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 DPY19L3Q6ZPD9 716 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 Q6ZVU0 165 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 OXNAD1Q96HP4 312 aaPredicted RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 LRIG1Q96JA1 1093 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 EXOC2Q96KP1 924 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 MAGEB18Q96M61 343 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 NSMCE3Q96MG7 304 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 TUBGCP5Q96RT8 1024 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 LRMDAQ9H2I8 198 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 SCUBE2Q9NQ36 999 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 EIF2B3Q9NR50 452 aaKnown RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 CACNA2D2Q9NY47 1150 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 HECAQ9UBI9 543 aaPredicted RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 LGALS13Q9UHV8 139 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 SNX24Q9Y343 169 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 TRIOO75962 3097 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 TCP11X1B4DZS4 312 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 DNALI1O14645 258 aaPredicted RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 SERPINF2P08697 491 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 C7P10643 843 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 NEFHP12036 1026 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 ITIH2P19823 946 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 RPL21P46778 160 aaKnown RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 GEMP55040 296 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 CDK16Q00536 496 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 RAD51Q06609 339 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 SIGLEC14Q08ET2 396 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 MPP3Q13368 585 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 CAMK2GQ13555 558 aaPredicted RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 C2orf27AQ580R0 203 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 KDELC1Q6UW63 502 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 PCGF5Q86SE9 256 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 EXOC3L1Q86VI1 746 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 RIBC1Q8N443 379 aaPredicted RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 BBOF1Q8ND07 529 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 SPATA22Q8NHS9 363 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 CPT1BQ92523 772 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 SNF8Q96H20 258 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 HEPHQ9BQS7 1158 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 MLPHQ9BV36 600 aaPredicted RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 SEMA4AQ9H3S1 761 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 TBC1D17Q9HA65 648 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 LMAN1LQ9HAT1 526 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 SLC24A3Q9HC58 644 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 PRSS16Q9NQE7 514 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 EVLQ9UI08 416 aaPredicted RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 L3MBTL1Q9Y468 752 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 TTLL3Q9Y4R7 772 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 MYO18AQ92614 2054 aaKnown RBP12.38□□□□□ -0.43
SCARB1-204ENST00000535005 TTC28Q96AY4 2481 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 TTC24A2A3L6 582 aaPredicted RBP12.38□□□□□ -0.43
SCARB1-204ENST00000535005 FAM170BA6NMN3 283 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 SMAPO00193 183 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 DCXO43602 365 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 ADAM23O75077 832 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 SIN3BO75182 1162 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 KLF8O95600 359 aaPredicted RBP12.38□□□□□ -0.43
SCARB1-204ENST00000535005 AP2A1O95782 977 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 EPOP01588 193 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 EPHX1P07099 455 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 KRT16P08779 473 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 HLA-EP13747 358 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 TPSB2P20231 275 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 CD86P42081 329 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 RASSF2P50749 326 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 SLC18A1P54219 525 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 ELAVL3Q14576 367 aaKnown RBP12.38□□□□□ -0.43
SCARB1-204ENST00000535005 KCNJ11Q14654 390 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 SETDB1Q15047 1291 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 TPSAB1Q15661 275 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 KCTD19Q17RG1 926 aaPredicted RBP12.38□□□□□ -0.43
SCARB1-204ENST00000535005 EOGTQ5NDL2 527 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 WASHC2DQ5SRD0 308 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 RNASEH2BQ5TBB1 312 aaKnown RBP12.38□□□□□ -0.43
SCARB1-204ENST00000535005 FAXCQ5TGI0 409 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 ENDOVQ8N8Q3 282 aaKnown RBP12.38□□□□□ -0.43
SCARB1-204ENST00000535005 EPS8L3Q8TE67 593 aaKnown RBP12.38□□□□□ -0.43
SCARB1-204ENST00000535005 SPOCK2Q92563 424 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 CLDN23Q96B33 292 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 NAF1Q96HR8 494 aaKnown RBP12.38□□□□□ -0.43
SCARB1-204ENST00000535005 RBM15Q96T37 977 aaKnown RBP eCLIP12.38□□□□□ -0.434e-7■■■■□ 21
SCARB1-204ENST00000535005 MTG2Q9H4K7 406 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 FBRSQ9HAH7 460 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 RNPEPL1Q9HAU8 725 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 FGFR1OP2Q9NVK5 253 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 MTF2Q9Y483 593 aaPredicted RBP12.38□□□□□ -0.43
SCARB1-204ENST00000535005 WASF2Q9Y6W5 498 aa12.38□□□□□ -0.43
SCARB1-204ENST00000535005 TMEM120BA0PK00 339 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 TP73O15350 636 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 SOCS5O75159 536 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 GJB3O75712 270 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 MT-CYBP00156 380 aaPredicted RBP12.37□□□□□ -0.43
SCARB1-204ENST00000535005 WNT3AP56704 352 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 BASP1P80723 227 aaKnown RBP12.37□□□□□ -0.43
SCARB1-204ENST00000535005 UBXN2BQ14CS0 331 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 MORF4L2Q15014 288 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 TAF11Q15544 211 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms