RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 DUOXA1Q1HG43 343 aa24.3■■□□□ 1.48
SIPA1-210ENST00000534406 NAPEPLDQ6IQ20 393 aa24.3■■□□□ 1.48
SIPA1-210ENST00000534406 DCLK2Q8N568 766 aa24.3■■□□□ 1.48
SIPA1-210ENST00000534406 C1orf216Q8TAB5 229 aa24.3■■□□□ 1.48
SIPA1-210ENST00000534406 IFT43Q96FT9 208 aa24.3■■□□□ 1.48
SIPA1-210ENST00000534406 OXNAD1Q96HP4 312 aaPredicted RBP24.3■■□□□ 1.48
SIPA1-210ENST00000534406 SERAC1Q96JX3 654 aa24.3■■□□□ 1.48
SIPA1-210ENST00000534406 PPP1R2P1Q96PQ5 205 aa24.3■■□□□ 1.48
SIPA1-210ENST00000534406 MCCC1Q96RQ3 725 aaPredicted RBP24.3■■□□□ 1.48
SIPA1-210ENST00000534406 EBF2Q9HAK2 575 aa24.3■■□□□ 1.48
SIPA1-210ENST00000534406 UBP1Q9NZI7 540 aa24.3■■□□□ 1.48
SIPA1-210ENST00000534406 PPIL1Q9Y3C6 166 aa24.3■■□□□ 1.48
SIPA1-210ENST00000534406 PRR5-ARHGAP8B1AHC4 643 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 GCATO75600 419 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 ANXA9O76027 345 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 CFIP05156 583 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 CTPS1P17812 591 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 HNRNPA2B1P22626 353 aaKnown RBP24.29■■□□□ 1.48
SIPA1-210ENST00000534406 TNNT3P45378 269 aaPredicted RBP24.29■■□□□ 1.48
SIPA1-210ENST00000534406 GEMP55040 296 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 ETF1P62495 437 aaKnown RBP24.29■■□□□ 1.48
SIPA1-210ENST00000534406 CDK18Q07002 472 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 SGCGQ13326 291 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 MPP3Q13368 585 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 KDELC1Q6UW63 502 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 SLC6A18Q96N87 628 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 TRIB3Q96RU7 358 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 SLC17A9Q9BYT1 436 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 SMOC1Q9H4F8 434 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 TM9SF3Q9HD45 589 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 SEMA4GQ9NTN9 838 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 SMARCAL1Q9NZC9 954 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 SLCO1B1Q9Y6L6 691 aa24.29■■□□□ 1.48
SIPA1-210ENST00000534406 A0A0J9YYE9 177 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 CAPN8A6NHC0 703 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 NPIPB15A6NHN6 443 aaPredicted RBP24.28■■□□□ 1.48
SIPA1-210ENST00000534406 ZNF185O15231 689 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 SLC31A1O15431 190 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 MMP20O60882 483 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 TM7SF2O76062 418 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 TRBC1P01850 177 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 ELFN1P0C7U0 828 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 C6P13671 934 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 AKT2P31751 481 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 LIG3P49916 1009 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 AFF3P51826 1226 aaKnown RBP24.28■■□□□ 1.48
SIPA1-210ENST00000534406 WNT3AP56704 352 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 RACK1P63244 317 aaKnown RBP24.28■■□□□ 1.48
SIPA1-210ENST00000534406 FGL2Q14314 439 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 GALNT3Q14435 633 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 PRPSAP1Q14558 356 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 CSRP2Q16527 193 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 TRIM61Q5EBN2 209 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 PRELID2Q8N945 189 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 IPMKQ8NFU5 416 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 ASB12Q8WXK4 309 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 RMDN1Q96DB5 314 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 SCRN2Q96FV2 425 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 C1QTNF2Q9BXJ5 285 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 AASDHPPTQ9NRN7 309 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 SAR1BQ9Y6B6 198 aa24.28■■□□□ 1.48
SIPA1-210ENST00000534406 PTPRZ1P23471 2315 aaPredicted RBP24.27■■□□□ 1.48
SIPA1-210ENST00000534406 GOLGA6L10A0A0M3HER8 536 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 PATE3B3GLJ2 98 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 PRAMEF26H0Y7S4 382 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 FANCGO15287 622 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 NDST3O95803 873 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 IFNB1P01574 187 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 ALPIP09923 528 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 ZNF806P0C7X5 589 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 ACTN2P35609 894 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 TEAD4Q15561 434 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 QPCTQ16769 361 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 P3H1Q32P28 736 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 SLC23A3Q6PIS1 610 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 LIPIQ6XZB0 460 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 KDELC2Q7Z4H8 507 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 CCDC89Q8N998 374 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 MYOCQ99972 504 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 GORASP1Q9BQQ3 440 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 C1QTNF7Q9BXJ2 289 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 FSD1LQ9BXM9 530 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 AP1M1Q9BXS5 423 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 NUSAP1Q9BXS6 441 aaKnown RBP24.27■■□□□ 1.48
SIPA1-210ENST00000534406 PARD6AQ9NPB6 346 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 FZD3Q9NPG1 666 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 DRG1Q9Y295 367 aaKnown RBP24.27■■□□□ 1.48
SIPA1-210ENST00000534406 AAR2Q9Y312 384 aaKnown RBP24.27■■□□□ 1.48
SIPA1-210ENST00000534406 LAMA1P25391 3075 aa24.27■■□□□ 1.48
SIPA1-210ENST00000534406 ZNF292O60281 2723 aa24.26■■□□□ 1.47
SIPA1-210ENST00000534406 A8MX80 341 aa24.26■■□□□ 1.47
SIPA1-210ENST00000534406 KHNYNO15037 678 aaKnown RBP24.26■■□□□ 1.47
SIPA1-210ENST00000534406 LZTS3O60299 673 aaPredicted RBP24.26■■□□□ 1.47
SIPA1-210ENST00000534406 HEXIM1O94992 359 aaKnown RBP24.26■■□□□ 1.47
SIPA1-210ENST00000534406 ARHGEF7Q14155 803 aa24.26■■□□□ 1.47
SIPA1-210ENST00000534406 CNGA3Q16281 694 aa24.26■■□□□ 1.47
SIPA1-210ENST00000534406 TCEAL6Q6IPX3 200 aa24.26■■□□□ 1.47
SIPA1-210ENST00000534406 CCDC70Q6NSX1 233 aa24.26■■□□□ 1.47
SIPA1-210ENST00000534406 GPR161Q8N6U8 529 aaKnown RBP24.26■■□□□ 1.47
SIPA1-210ENST00000534406 TMEM145Q8NBT3 493 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms