RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 GGT7Q9UJ14 662 aa11.97□□□□□ -0.49
COMMD9-208ENST00000533643 FZD4Q9ULV1 537 aa11.97□□□□□ -0.49
COMMD9-208ENST00000533643 NCKAP1Q9Y2A7 1128 aa11.97□□□□□ -0.49
COMMD9-208ENST00000533643 SPO11Q9Y5K1 396 aa11.97□□□□□ -0.49
COMMD9-208ENST00000533643 A0A0U1RQS6 177 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 NPIPB15A6NHN6 443 aaPredicted RBP11.96□□□□□ -0.49
COMMD9-208ENST00000533643 A8MX80 341 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 SMAPO00193 183 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 NDC80O14777 642 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 AXIN1O15169 862 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 SLC7A4O43246 635 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 AP1G1O43747 822 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 AVILO75366 819 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 MMP12P39900 470 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 MAGEA3P43357 314 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 PLTPP55058 493 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 FAM193AP78312 1265 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 SARNPP82979 210 aaKnown RBP11.96□□□□□ -0.49
COMMD9-208ENST00000533643 CSTF1Q05048 431 aaKnown RBP11.96□□□□□ -0.49
COMMD9-208ENST00000533643 CCDC15Q0P6D6 951 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 CDH17Q12864 832 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 CALCOCO2Q13137 446 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 MAP7D1Q3KQU3 841 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 CERCAMQ5T4B2 595 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 CRTC1Q6UUV9 634 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 USP45Q70EL2 814 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 FAM124AQ86V42 546 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 KBTBD6Q86V97 674 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 NDUFAF2Q8N183 169 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 DNAAF3Q8N9W5 541 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 IFT81Q8WYA0 676 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 RAB7BQ96AH8 199 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 PWWP2AQ96N64 755 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 SERPINB12Q96P63 405 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 ANKZF1Q9H8Y5 726 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 MAGEE1Q9HCI5 957 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 XAB2Q9HCS7 855 aaKnown RBP11.96□□□□□ -0.49
COMMD9-208ENST00000533643 FAM114A2Q9NRY5 505 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 ZDHHC18Q9NUE0 388 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 B4GALT6Q9UBX8 382 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.96□□□□□ -0.49
COMMD9-208ENST00000533643 CYP8B1Q9UNU6 501 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 ITM2BQ9Y287 266 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 FADS3Q9Y5Q0 445 aa11.96□□□□□ -0.49
COMMD9-208ENST00000533643 V9GYY5 206 aaPredicted RBP11.96□□□□□ -0.49
COMMD9-208ENST00000533643 CAPN8A6NHC0 703 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 PRR33A8MZF0 331 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 AURKAO14965 403 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 PLRG1O43660 514 aaKnown RBP11.95□□□□□ -0.5
COMMD9-208ENST00000533643 ZNF217O75362 1048 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 MLNP12872 115 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 OXTRP30559 389 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 VIPR1P32241 457 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 NPY2RP49146 381 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 FNTBP49356 437 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 CARSP49589 748 aaKnown RBP11.95□□□□□ -0.5
COMMD9-208ENST00000533643 ADPRHP54922 357 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 SESN2P58004 480 aaPredicted RBP11.95□□□□□ -0.5
COMMD9-208ENST00000533643 CAV1Q03135 178 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 ELP6Q0PNE2 266 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 RALGDSQ12967 914 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 MTM1Q13496 603 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 CDKN3Q16667 212 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 ERCC6LQ2NKX8 1250 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 TMEM52BQ4KMG9 183 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 MSS51Q4VC12 460 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 FNBP1LQ5T0N5 605 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 ERAP2Q6P179 960 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 DPPA4Q7L190 304 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 TSPAN33Q86UF1 283 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 IFT20Q8IY31 132 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 FAM160A2Q8N612 972 aaPredicted RBP11.95□□□□□ -0.5
COMMD9-208ENST00000533643 FRMD1Q8N878 549 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 OR14C36Q8NHC7 312 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 FBXO25Q8TCJ0 367 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 RLN3Q8WXF3 142 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 UBXN4Q92575 508 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 LYSMD1Q96S90 227 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 SGK2Q9HBY8 427 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 FBXO4Q9UKT5 387 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 INVSQ9Y283 1065 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 ANKRD36A6QL64 1941 aa11.95□□□□□ -0.5
COMMD9-208ENST00000533643 CACNA1IQ9P0X4 2223 aa11.94□□□□□ -0.5
COMMD9-208ENST00000533643 IGHV1OR15-9A0A0B4J2B8 117 aa11.94□□□□□ -0.5
COMMD9-208ENST00000533643 CCDC163A0A0D9SF12 145 aa11.94□□□□□ -0.5
COMMD9-208ENST00000533643 AP3B1O00203 1094 aa11.94□□□□□ -0.5
COMMD9-208ENST00000533643 NEMP1O14524 444 aa11.94□□□□□ -0.5
COMMD9-208ENST00000533643 TSPAN6O43657 245 aa11.94□□□□□ -0.5
COMMD9-208ENST00000533643 CLDN7O95471 211 aa11.94□□□□□ -0.5
COMMD9-208ENST00000533643 CYP2A6P11509 494 aaPredicted RBP11.94□□□□□ -0.5
COMMD9-208ENST00000533643 LHCGRP22888 699 aa11.94□□□□□ -0.5
COMMD9-208ENST00000533643 NFKBIAP25963 317 aa11.94□□□□□ -0.5
COMMD9-208ENST00000533643 MGAT1P26572 445 aa11.94□□□□□ -0.5
COMMD9-208ENST00000533643 ACSL1P33121 698 aa11.94□□□□□ -0.5
COMMD9-208ENST00000533643 CRADDP78560 199 aa11.94□□□□□ -0.5
COMMD9-208ENST00000533643 CBLBQ13191 982 aa11.94□□□□□ -0.5
COMMD9-208ENST00000533643 CUL1Q13616 776 aa11.94□□□□□ -0.5
COMMD9-208ENST00000533643 NAA30Q147X3 362 aaPredicted RBP11.94□□□□□ -0.5
COMMD9-208ENST00000533643 CNGA3Q16281 694 aa11.94□□□□□ -0.5
COMMD9-208ENST00000533643 DENND2CQ68D51 928 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms