RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 CBARPQ8N350 705 aaPredicted RBP12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 PDCD6IPQ8WUM4 868 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 FEM1CQ96JP0 617 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 EBF2Q9HAK2 575 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 A0A087WUV0 522 aaPredicted RBP12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 LRRC72A6NJI9 287 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 MAP3K13O43283 966 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 LATO43561 262 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 TSPAN6O43657 245 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 IFNB1P01574 187 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 ATXN1LP0C7T5 689 aaKnown RBP12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 MMP12P39900 470 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 PTGER3P43115 390 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 SEMG2Q02383 582 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 TMEM259Q4ZIN3 620 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 ARHGEF18Q6ZSZ5 1173 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 DPPA4Q7L190 304 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 LPCAT2Q7L5N7 544 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 ZNF572Q7Z3I7 529 aaPredicted RBP12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 TRIM69Q86WT6 500 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 BIRC7Q96CA5 298 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 SCRN2Q96FV2 425 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 FAM107BQ9H098 131 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 DDX47Q9H0S4 455 aaKnown RBP12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 CDC23Q9UJX2 597 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 MUC6Q6W4X9 2439 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 THADAQ6YHU6 1953 aa12.78□□□□□ -0.36
RPUSD4-208ENST00000533628 TBC1D3DA0A087WVF3 549 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 TBC1D3IA0A087WXS9 549 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 TBC1D3EA0A087X179 549 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 TBC1D3KA0A087X1G2 549 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 A0A0J9YYE9 177 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 GOLGA6L10A0A0M3HER8 536 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 TBC1D3FA6NER0 549 aaPredicted RBP12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 FAM47DPA6NHR8 397 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 TBC1D3LB9A6J9 549 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 RNGTTO60942 597 aaKnown RBP12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 ANXA9O76027 345 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 TRBC1P01850 177 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 TBC1D3HP0C7X1 549 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 CA4P22748 312 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 CALRP27797 417 aaKnown RBP12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 PAFAH1B1P43034 410 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 PTGIRP43119 386 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 GEMP55040 296 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 FGL2Q14314 439 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 PCSK7Q16549 785 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 CDKN3Q16667 212 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 ZNF284Q2VY69 593 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 CFAP58Q5T655 872 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 TBC1D3GQ6DHY5 549 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 TBC1D3CQ6IPX1 549 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 RANBP10Q6VN20 620 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 TBC1D3Q8IZP1 549 aaPredicted RBP12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 DNASE2BQ8WZ79 361 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 SLCO2A1Q92959 643 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 LYSMD1Q96S90 227 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 ETNK1Q9HBU6 452 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 PAK5Q9P286 719 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 B4GALT6Q9UBX8 382 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 PCYOX1Q9UHG3 505 aa12.77□□□□□ -0.36
RPUSD4-208ENST00000533628 A0A1W2PQU0 124 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 NPIPB15A6NHN6 443 aaPredicted RBP12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 ANKRD66B4E2M5 251 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 PROB1E7EW31 1015 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 RHOBTB1O94844 696 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 NDST3O95803 873 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 ALPIP09923 528 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 CTPS1P17812 591 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 GM2AP17900 193 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 HNF1BP35680 557 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 NHLH1Q02575 133 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 ELP6Q0PNE2 266 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 OLIG2Q13516 323 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 GALNT3Q14435 633 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 PRPSAP1Q14558 356 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 FAXCQ5TGI0 409 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 SEL1L3Q68CR1 1132 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 KDELC2Q7Z4H8 507 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 HORMAD1Q86X24 394 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 CCDC89Q8N998 374 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 LPCAT1Q8NF37 534 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 C1orf216Q8TAB5 229 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 HSPA12BQ96MM6 686 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 PPP1R2P1Q96PQ5 205 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 C1QTNF2Q9BXJ5 285 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 SEMA4AQ9H3S1 761 aa12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 AAR2Q9Y312 384 aaKnown RBP12.77□□□□□ -0.37
RPUSD4-208ENST00000533628 CCDC188H7C350 402 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 URI1O94763 535 aaPredicted RBP12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 PCDH8O95206 1070 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 AGTP01019 485 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 LHCGRP22888 699 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 XPAP23025 273 aaPredicted RBP12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 FDFT1P37268 417 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 CHRNA4P43681 627 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 GRIA4P48058 902 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 LMNB2Q03252 620 aa12.76□□□□□ -0.37
RPUSD4-208ENST00000533628 MSLNQ13421 630 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms