RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 SMARCAL1Q9NZC9 954 aa2.78□□□□□ -1.96
ATM-220ENST00000533526 HSPB7Q9UBY9 170 aa2.78□□□□□ -1.96
ATM-220ENST00000533526 SLCO3A1Q9UIG8 710 aa2.78□□□□□ -1.96
ATM-220ENST00000533526 ZNF112Q9UJU3 913 aa2.78□□□□□ -1.96
ATM-220ENST00000533526 CNTNAP2Q9UHC6 1331 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 A0A1B0GVC2 190 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 hDV102S1A0JD36 115 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 MAGEA13PA6NCF6 341 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 USP17L23D6RBM5 183 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 PRR23D1E9PI22 279 aaPredicted RBP2.77□□□□□ -1.97
ATM-220ENST00000533526 SEC14L5O43304 696 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 ZIC3O60481 467 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 PPP1R3DO95685 299 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 F9P00740 461 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 PRR23D2P0DMB1 279 aaPredicted RBP2.77□□□□□ -1.97
ATM-220ENST00000533526 SRCP12931 536 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 RRM1P23921 792 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 HNRNPH1P31943 449 aaKnown RBP2.77□□□□□ -1.97
ATM-220ENST00000533526 ABCD1P33897 745 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 CPOXP36551 454 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 EIF3BP55884 814 aaKnown RBP2.77□□□□□ -1.97
ATM-220ENST00000533526 DLG1Q12959 904 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 MYBPHQ13203 477 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 RNPS1Q15287 305 aaKnown RBP2.77□□□□□ -1.97
ATM-220ENST00000533526 SF3B4Q15427 424 aaKnown RBP eCLIP2.77□□□□□ -1.97
ATM-220ENST00000533526 AMZ1Q400G9 498 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 SLC9B1Q4ZJI4 515 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 FAM69AQ5T7M9 428 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 FAM69BQ5VUD6 431 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 PLEKHA7Q6IQ23 1121 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 METTL2BQ6P1Q9 378 aaKnown RBP2.77□□□□□ -1.97
ATM-220ENST00000533526 RHBDF2Q6PJF5 856 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 GSTA5Q7RTV2 222 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 ARMC9Q7Z3E5 817 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 EXOC3L1Q86VI1 746 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 PGBD5Q8N414 524 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 IL17REQ8NFR9 667 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 BICD1Q96G01 975 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 SCMH1Q96GD3 660 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 METTL2AQ96IZ6 378 aaKnown RBP2.77□□□□□ -1.97
ATM-220ENST00000533526 ADGRG7Q96K78 797 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 SH3GL2Q99962 352 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 KXD1Q9BQD3 176 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 NUF2Q9BZD4 464 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 PAIP1Q9H074 479 aaKnown RBP2.77□□□□□ -1.97
ATM-220ENST00000533526 PDCL3Q9H2J4 239 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 TTYH1Q9H313 450 aaPredicted RBP2.77□□□□□ -1.97
ATM-220ENST00000533526 PLEKHA4Q9H4M7 779 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 BRF2Q9HAW0 419 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 PREBQ9HCU5 417 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 RCOR1Q9UKL0 485 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 SARDHQ9UL12 918 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 ARHGAP26Q9UNA1 814 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 CDC14AQ9UNH5 594 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 PROCRQ9UNN8 238 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 CRYL1Q9Y2S2 319 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 TMEM98Q9Y2Y6 226 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 LSM4Q9Y4Z0 139 aaKnown RBP2.77□□□□□ -1.97
ATM-220ENST00000533526 SNX9Q9Y5X1 595 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 SCINQ9Y6U3 715 aa2.77□□□□□ -1.97
ATM-220ENST00000533526 TRIP12Q14669 1992 aaPredicted RBP2.76□□□□□ -1.97
ATM-220ENST00000533526 A0A1W2PQM1 296 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 PLSCR5A0PG75 271 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 TMEM202A6NGA9 273 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 AKR1B15C9JRZ8 316 aaPredicted RBP2.76□□□□□ -1.97
ATM-220ENST00000533526 NPIPB11E5RHQ5 1161 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 BCAT2O15382 392 aaPredicted RBP2.76□□□□□ -1.97
ATM-220ENST00000533526 KRT36O76013 467 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 SNRNP70P08621 437 aaKnown RBP2.76□□□□□ -1.97
ATM-220ENST00000533526 ABCD3P28288 659 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 SHMT1P34896 483 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 GGT5P36269 586 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 PIGAP37287 484 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 PDLIM4P50479 330 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 METAP2P50579 478 aaKnown RBP eCLIP2.76□□□□□ -1.97
ATM-220ENST00000533526 TUBP50607 506 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 NEXNQ0ZGT2 675 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 GRSF1Q12849 480 aaKnown RBP eCLIP2.76□□□□□ -1.97
ATM-220ENST00000533526 GRIK3Q13003 919 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 COASYQ13057 564 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 DHX34Q14147 1143 aaKnown RBP2.76□□□□□ -1.97
ATM-220ENST00000533526 OASLQ15646 514 aaKnown RBP2.76□□□□□ -1.97
ATM-220ENST00000533526 ATP13A5Q4VNC0 1218 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 SGO1Q5FBB7 561 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 INTS11Q5TA45 600 aaKnown RBP2.76□□□□□ -1.97
ATM-220ENST00000533526 SLC9C2Q5TAH2 1124 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 C9orf57Q5W0N0 161 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 WBP2NLQ6ICG8 309 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 ACAD10Q6JQN1 1059 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 KRBA2Q6ZNG9 492 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 SLC46A3Q7Z3Q1 461 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 DHX40Q8IX18 779 aaKnown RBP2.76□□□□□ -1.97
ATM-220ENST00000533526 LILRB1Q8NHL6 650 aaPredicted RBP2.76□□□□□ -1.97
ATM-220ENST00000533526 WFIKKN2Q8TEU8 576 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 CREB3L4Q8TEY5 395 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 ERGIC1Q969X5 290 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 SEC62Q99442 399 aaKnown RBP2.76□□□□□ -1.97
ATM-220ENST00000533526 MPHOSPH8Q99549 860 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 FAM110AQ9BQ89 295 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 HEMGNQ9BXL5 484 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 293.1 ms