RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 PORP16435 677 aaPredicted RBP12.3□□□□□ -0.44
BDNF-218ENST00000533246 FASP25445 335 aa12.3□□□□□ -0.44
BDNF-218ENST00000533246 NUP107P57740 925 aa12.3□□□□□ -0.44
BDNF-218ENST00000533246 ELAVL2Q12926 359 aaKnown RBP12.3□□□□□ -0.44
BDNF-218ENST00000533246 SKIV2LQ15477 1246 aaKnown RBP12.3□□□□□ -0.44
BDNF-218ENST00000533246 CCDC142Q17RM4 750 aa12.3□□□□□ -0.44
BDNF-218ENST00000533246 LINGO4Q6UY18 593 aa12.3□□□□□ -0.44
BDNF-218ENST00000533246 CMASQ8NFW8 434 aaPredicted RBP12.3□□□□□ -0.44
BDNF-218ENST00000533246 FAM120BQ96EK7 910 aaKnown RBP12.3□□□□□ -0.44
BDNF-218ENST00000533246 CYP2S1Q96SQ9 504 aa12.3□□□□□ -0.44
BDNF-218ENST00000533246 RNF38Q9H0F5 515 aa12.3□□□□□ -0.44
BDNF-218ENST00000533246 HMX1Q9NP08 348 aaPredicted RBP12.3□□□□□ -0.44
BDNF-218ENST00000533246 TAS2R1Q9NYW7 299 aa12.3□□□□□ -0.44
BDNF-218ENST00000533246 VTI1BQ9UEU0 232 aa12.3□□□□□ -0.44
BDNF-218ENST00000533246 VWA7Q9Y334 891 aa12.3□□□□□ -0.44
BDNF-218ENST00000533246 SPO11Q9Y5K1 396 aa12.3□□□□□ -0.44
BDNF-218ENST00000533246 MYO18AQ92614 2054 aaKnown RBP12.3□□□□□ -0.44
BDNF-218ENST00000533246 MYH6P13533 1939 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 TTC24A2A3L6 582 aaPredicted RBP12.29□□□□□ -0.44
BDNF-218ENST00000533246 MT-ND1P03886 318 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 ASGR1P07306 291 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 ANPEPP15144 967 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 NMBRP28336 390 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 AKR1D1P51857 326 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 IL2P60568 153 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 TUSC3Q13454 348 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 FSTL4Q6MZW2 842 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 PIGWQ7Z7B1 504 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 SYTL1Q8IYJ3 562 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 TEPSINQ96N21 525 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 ASB8Q9H765 288 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 COPG2Q9UBF2 871 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 MFHAS1Q9Y4C4 1052 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 ROBO1Q9Y6N7 1651 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 C1orf232A0A0U1RR37 186 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 RGSL1A5PLK6 1076 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 C16orf96A6NNT2 1141 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 H0YGN5 161 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 ZNF7P17097 686 aaPredicted RBP12.29□□□□□ -0.44
BDNF-218ENST00000533246 ATF4P18848 351 aaPredicted RBP12.29□□□□□ -0.44
BDNF-218ENST00000533246 HLA-DPA1P20036 260 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 SLC5A3P53794 718 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 SMAD3P84022 425 aaKnown RBP12.29□□□□□ -0.44
BDNF-218ENST00000533246 DSC2Q02487 901 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 FAM110CQ1W6H9 321 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 SCARA3Q6AZY7 606 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 ARCQ7LC44 396 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 SNX27Q96L92 541 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 GMIPQ9P107 970 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 NFS1Q9Y697 457 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 BCLAF3A2AJT9 711 aaKnown RBP12.29□□□□□ -0.44
BDNF-218ENST00000533246 SERPINA6P08185 405 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 PSME3P61289 254 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 NRG1Q02297 640 aaPredicted RBP12.29□□□□□ -0.44
BDNF-218ENST00000533246 BCL2L1Q07817 233 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 RALGPS1Q5JS13 557 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 TAC4Q86UU9 113 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 TOP6BLQ8N6T0 577 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 ATG16L2Q8NAA4 619 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 FBXO30Q8TB52 745 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 MCRS1Q96EZ8 462 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 C12orf42Q96LP6 360 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 LENG8Q96PV6 779 aaPredicted RBP12.29□□□□□ -0.44
BDNF-218ENST00000533246 FERD3LQ96RJ6 166 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 GPATCH1Q9BRR8 931 aaKnown RBP12.29□□□□□ -0.44
BDNF-218ENST00000533246 SLC25A23Q9BV35 468 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 GATA5Q9BWX5 397 aaPredicted RBP12.29□□□□□ -0.44
BDNF-218ENST00000533246 TIMM22Q9Y584 194 aa12.29□□□□□ -0.44
BDNF-218ENST00000533246 CCDC154A6NI56 674 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 ARHGEF9O43307 516 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 FGFR1P11362 822 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 RPL17P18621 184 aaKnown RBP12.28□□□□□ -0.44
BDNF-218ENST00000533246 CDK18Q07002 472 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 ARHGAP1Q07960 439 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 SPRED3Q2MJR0 410 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 RAB6CQ53S08 254 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 PIWIL4Q7Z3Z4 852 aaKnown RBP12.28□□□□□ -0.44
BDNF-218ENST00000533246 BNIPLQ7Z465 357 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 ADCK1Q86TW2 530 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 ACMSDQ8TDX5 336 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 ZNF317Q96PQ6 595 aaPredicted RBP12.28□□□□□ -0.44
BDNF-218ENST00000533246 CCDC28BQ9BUN5 200 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 RAB6CQ9H0N0 254 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 WDR6Q9NNW5 1121 aaKnown RBP12.28□□□□□ -0.44
BDNF-218ENST00000533246 ARL15Q9NXU5 204 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 ZNF212Q9UDV6 495 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 RAP2CQ9Y3L5 183 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 MGAT4DA6NG13 374 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 FAM58BPP0C7Q3 252 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 PIK3R1P27986 724 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 SEMG2Q02383 582 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 EIF2B5Q13144 721 aaKnown RBP12.28□□□□□ -0.44
BDNF-218ENST00000533246 FRG1Q14331 258 aaKnown RBP12.28□□□□□ -0.44
BDNF-218ENST00000533246 CPSF6Q16630 551 aaKnown RBP eCLIP12.28□□□□□ -0.44
BDNF-218ENST00000533246 ZNF284Q2VY69 593 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 ARMC12Q5T9G4 340 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 CLEC6AQ6EIG7 209 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 CENPLQ8N0S6 344 aaPredicted RBP12.28□□□□□ -0.44
BDNF-218ENST00000533246 TCAIMQ8N3R3 496 aa12.28□□□□□ -0.44
BDNF-218ENST00000533246 STAG3L4Q8TBR4 150 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms