RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 TBX4P57082 545 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 CLDN2P57739 230 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 TAS2R38P59533 333 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 FZD2Q14332 565 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 HADHQ16836 314 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 WHAMMP3Q1A5X7 153 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 SLC25A52Q3SY17 297 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 ATP13A4Q4VNC1 1196 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 MS4A13Q5J8X5 152 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 LRRC38Q5VT99 294 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 HIST2H2BCQ6DN03 193 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 NADSYN1Q6IA69 706 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 MSANTD2Q6P1R3 559 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 GCNT7Q6ZNI0 430 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 VASH2Q86V25 355 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 CREG2Q8IUH2 290 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 APCDD1Q8J025 514 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 LMX1AQ8TE12 382 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 FAM172AQ8WUF8 416 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 BTN2A2Q8WVV5 523 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 HTR3CQ8WXA8 447 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 CENPIQ92674 756 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 TMEM159Q96B96 161 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 MS4A14Q96JA4 679 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 CAPZA3Q96KX2 299 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 TMEM74Q96NL1 305 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 TBCBQ99426 244 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 NPY6RQ99463 290 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 CAAP1Q9H8G2 361 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 GPR27Q9NS67 375 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 PCSK1NQ9UHG2 260 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 IPO11Q9UI26 975 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 KIF26BQ2KJY2 2108 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 USP9YO00507 2555 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 CES2O00748 559 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 PSTPIP1O43586 416 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 KRT38O76015 456 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 ENDOD1O94919 500 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 JUNDP17535 347 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 DESP17661 470 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 CD82P27701 267 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 IL1R2P27930 398 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 GJC1P36383 396 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 RABIFP47224 123 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 SULT1E1P49888 294 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 PITX1P78337 314 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 CDO1Q16878 200 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 ACCSLQ4AC99 568 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 PIP5KL1Q5T9C9 394 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 TXNRD3NBQ6F5E7 133 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 ESRP1Q6NXG1 681 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 SCYL2Q6P3W7 929 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 KYAT3Q6YP21 454 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 BEND5Q7L4P6 421 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 CFAP52Q8N1V2 620 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 NT5C3BQ969T7 300 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 GFM1Q96RP9 751 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 NCAPGQ9BPX3 1015 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 TRIM62Q9BVG3 475 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 CARD6Q9BX69 1037 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 CARD9Q9H257 536 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 ZWILCHQ9H900 591 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 TMPRSS4Q9NRS4 437 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 NYNRINQ9P2P1 1898 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 SPASTQ9UBP0 616 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 RNF14Q9UBS8 474 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 PISDQ9UG56 409 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 STAP1Q9ULZ2 295 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 PADI4Q9UM07 663 aa11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRAPPC4-213ENST00000533149 M0QYT0 321 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 PDE2AO00408 941 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 PRPSAP2O60256 369 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 PCDH8O95206 1070 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 ZRANB2O95218 330 aaKnown RBP eCLIP11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 KRT7P08729 469 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 PYGMP11217 842 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 HGFP14210 728 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 WT1P19544 449 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 CCKBRP32239 447 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 PAFAH1B1P43034 410 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 OXCT1P55809 520 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 HDAC4P56524 1084 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 BOLA3Q53S33 107 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 AADACL2Q6P093 401 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 STRADAQ7RTN6 431 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 B3GNT8Q7Z7M8 397 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 DTX1Q86Y01 620 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 SLC35F3Q8IY50 421 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 KATNAL2Q8IYT4 538 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 RCOR2Q8IZ40 523 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 RASGEF1CQ8N431 466 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 RNF34Q969K3 372 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 BMFQ96LC9 184 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 SLC12A9Q9BXP2 914 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 DYRK4Q9NR20 520 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 DDX56Q9NY93 547 aaKnown RBP11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 RRN3Q9NYV6 651 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 SMARCAL1Q9NZC9 954 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 SLC25A13Q9UJS0 675 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms