RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 FAM181AQ8N9Y4 354 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 APOLD1Q96LR9 279 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 NSMCE3Q96MG7 304 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 IL12RB2Q99665 862 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 ANP32EQ9BTT0 268 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 APOOQ9BUR5 198 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 NT5MQ9NPB1 228 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 PHTF1Q9UMS5 762 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 MATN3O15232 486 aa17.31■□□□□ 0.36
PHRF1-204ENST00000532550 HTRA2O43464 458 aaPredicted RBP17.31■□□□□ 0.36
PHRF1-204ENST00000532550 MFSD11O43934 449 aa17.31■□□□□ 0.36
PHRF1-204ENST00000532550 RECQL5O94762 991 aaPredicted RBP17.31■□□□□ 0.36
PHRF1-204ENST00000532550 CKMT1AP12532 417 aa17.31■□□□□ 0.36
PHRF1-204ENST00000532550 CCNCP24863 283 aa17.31■□□□□ 0.36
PHRF1-204ENST00000532550 GALNT2Q10471 571 aa17.31■□□□□ 0.36
PHRF1-204ENST00000532550 ACOX1Q15067 660 aa17.31■□□□□ 0.36
PHRF1-204ENST00000532550 PRRT3Q5FWE3 981 aa17.31■□□□□ 0.36
PHRF1-204ENST00000532550 HES3Q5TGS1 186 aa17.31■□□□□ 0.36
PHRF1-204ENST00000532550 ENPP7Q6UWV6 458 aa17.31■□□□□ 0.36
PHRF1-204ENST00000532550 PHACTR4Q8IZ21 702 aa17.31■□□□□ 0.36
PHRF1-204ENST00000532550 TEX26Q8N6G2 289 aa17.31■□□□□ 0.36
PHRF1-204ENST00000532550 ATL2Q8NHH9 583 aa17.31■□□□□ 0.36
PHRF1-204ENST00000532550 USP29Q9HBJ7 922 aa17.31■□□□□ 0.36
PHRF1-204ENST00000532550 HAUS2Q9NVX0 235 aa17.31■□□□□ 0.36
PHRF1-204ENST00000532550 APOBEC3BQ9UH17 382 aaKnown RBP17.31■□□□□ 0.36
PHRF1-204ENST00000532550 SRRM3A6NNA2 597 aaPredicted RBP17.3■□□□□ 0.36
PHRF1-204ENST00000532550 TPP1O14773 563 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 CPP00450 1065 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 CAPNS1P04632 268 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 PCCBP05166 539 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 CYP2A6P11509 494 aaPredicted RBP17.3■□□□□ 0.36
PHRF1-204ENST00000532550 CTSEP14091 401 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 MX2P20592 715 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 CES1P23141 567 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 RALGDSQ12967 914 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 TARDBPQ13148 414 aaKnown RBP eCLIP17.3■□□□□ 0.36
PHRF1-204ENST00000532550 MTM1Q13496 603 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 C1orf61Q13536 156 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 CAMK2BQ13554 666 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 DEFB133Q30KQ1 61 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 ODF2Q5BJF6 829 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 ZCCHC8Q6NZY4 707 aaKnown RBP17.3■□□□□ 0.36
PHRF1-204ENST00000532550 HID1Q8IV36 788 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 RBFAQ8N0V3 343 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 NDUFAF2Q8N183 169 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 MDM1Q8TC05 714 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 SPOCK2Q92563 424 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 RAPGEF5Q92565 580 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 FAF2Q96CS3 445 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 TBATAQ96M53 351 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 TSGA13Q96PP4 275 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 SEMA3CQ99985 751 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 MAK16Q9BXY0 300 aaKnown RBP17.3■□□□□ 0.36
PHRF1-204ENST00000532550 POLR1EQ9GZS1 481 aaKnown RBP17.3■□□□□ 0.36
PHRF1-204ENST00000532550 TCEAL2Q9H3H9 227 aaPredicted RBP17.3■□□□□ 0.36
PHRF1-204ENST00000532550 RBM22Q9NW64 420 aaKnown RBP eCLIP17.3■□□□□ 0.36
PHRF1-204ENST00000532550 NCKIPSDQ9NZQ3 722 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 B4GALT6Q9UBX8 382 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 SALL4Q9UJQ4 1053 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 INTUQ9ULD6 942 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 OR1A2Q9Y585 309 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 ACACAQ13085 2346 aa17.3■□□□□ 0.36
PHRF1-204ENST00000532550 LRRD1A4D1F6 860 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 MTA2O94776 668 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 MAP3K6O95382 1288 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 ANXA6P08133 673 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 MYF5P13349 255 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 KRT10P13645 584 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 CLDN6P56747 220 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 TRAF2Q12933 501 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 NFATC4Q14934 902 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 ARMC12Q5T9G4 340 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 RD3Q7Z3Z2 195 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 PROSER1Q86XN7 944 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 PQLC3Q8N755 202 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 CCNYQ8ND76 341 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.29■□□□□ 0.36
PHRF1-204ENST00000532550 SCG3Q8WXD2 468 aaKnown RBP17.29■□□□□ 0.36
PHRF1-204ENST00000532550 RFFLQ8WZ73 363 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 GLMNQ92990 594 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 TSACCQ96A04 125 aaPredicted RBP17.29■□□□□ 0.36
PHRF1-204ENST00000532550 ZNF830Q96NB3 372 aaPredicted RBP17.29■□□□□ 0.36
PHRF1-204ENST00000532550 RNF157Q96PX1 679 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 ABCG4Q9H172 646 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 KCTD5Q9NXV2 234 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 AMACRQ9UHK6 382 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 PNMA8BQ9ULN7 279 aaPredicted RBP17.29■□□□□ 0.36
PHRF1-204ENST00000532550 DOLKQ9UPQ8 538 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 RAI2Q9Y5P3 530 aa17.29■□□□□ 0.36
PHRF1-204ENST00000532550 MYLKQ15746 1914 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 LMO7DNF2Z398 122 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 TAF4O00268 1085 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 CACNB4O00305 520 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-204ENST00000532550 GCATO75600 419 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 RASGRP1O95267 797 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 PGLSO95336 258 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 TNFP01375 233 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 CCNB1P14635 433 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 TSHRP16473 764 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 VIPR1P32241 457 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms