RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 BASP1P80723 227 aaKnown RBP12.59□□□□□ -0.39
COPB1-208ENST00000532088 SARNPP82979 210 aaKnown RBP12.59□□□□□ -0.39
COPB1-208ENST00000532088 CBLBQ13191 982 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 KCNJ11Q14654 390 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 MORF4L2Q15014 288 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 TRIP13Q15645 432 aaPredicted RBP12.59□□□□□ -0.39
COPB1-208ENST00000532088 CFAP58Q5T655 872 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 RNASEH2BQ5TBB1 312 aaKnown RBP12.59□□□□□ -0.39
COPB1-208ENST00000532088 RANBP10Q6VN20 620 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 PRUNE1Q86TP1 453 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 CAMK1DQ8IU85 385 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 PPIL6Q8IXY8 311 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 MCUQ8NE86 351 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 GRIN3AQ8TCU5 1115 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 RUBCNQ92622 972 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 IFT43Q96FT9 208 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 SNF8Q96H20 258 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 KLHL32Q96NJ5 620 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 LYSMD1Q96S90 227 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 LRRC1Q9BTT6 524 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 FSD1LQ9BXM9 530 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 EPHX3Q9H6B9 360 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 WHRNQ9P202 907 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 USP36Q9P275 1121 aaKnown RBP12.59□□□□□ -0.39
COPB1-208ENST00000532088 SARDHQ9UL12 918 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 PCDHGC4Q9Y5F7 938 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 VCANP13611 3396 aa12.58□□□□□ -0.39
COPB1-208ENST00000532088 PRR33A8MZF0 331 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 E7EVH7 732 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 K7ESF4 209 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 KPNA3O00505 521 aaPredicted RBP12.58□□□□□ -0.4
COPB1-208ENST00000532088 AP1G1O43747 822 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 ZNF217O75362 1048 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 PMPCBO75439 489 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 SEC31AO94979 1220 aaKnown RBP12.58□□□□□ -0.4
COPB1-208ENST00000532088 CPP00450 1065 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 APRTP07741 180 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 ACADMP11310 421 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 MLNP12872 115 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 OXTRP30559 389 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 GKP32189 559 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 DRD3P35462 400 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 PSMD8P48556 350 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 CAV1Q03135 178 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 PPP1R21Q6ZMI0 780 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 ERN2Q76MJ5 926 aaKnown RBP12.58□□□□□ -0.4
COPB1-208ENST00000532088 PARS2Q7L3T8 475 aaKnown RBP12.58□□□□□ -0.4
COPB1-208ENST00000532088 RAVER1Q8IY67 606 aaKnown RBP12.58□□□□□ -0.4
COPB1-208ENST00000532088 DEPDC4Q8N2C3 294 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 TMEM105Q8N8V8 129 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 NAT8LQ8N9F0 302 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 DTWD2Q8NBA8 298 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 IPMKQ8NFU5 416 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 PIH1D2Q8WWB5 315 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 CPT1BQ92523 772 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 ARRDC3Q96B67 414 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 MCCC1Q96RQ3 725 aaPredicted RBP12.58□□□□□ -0.4
COPB1-208ENST00000532088 C19orf43Q9BQ61 176 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 TBL1YQ9BQ87 522 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 TRIM51Q9BSJ1 452 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 RRAGDQ9NQL2 400 aaPredicted RBP12.58□□□□□ -0.4
COPB1-208ENST00000532088 ITM2CQ9NQX7 267 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 SPATA6Q9NWH7 488 aaPredicted RBP12.58□□□□□ -0.4
COPB1-208ENST00000532088 FBXO4Q9UKT5 387 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 SHOC2Q9UQ13 582 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 NCKAP1Q9Y2A7 1128 aa12.58□□□□□ -0.4
COPB1-208ENST00000532088 UPK3BL1B0FP48 263 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 ANKRD66B4E2M5 251 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 UPK3BL2E5RIL1 263 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 AXIN1O15169 862 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 MID1O15344 667 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 LAMTOR5O43504 91 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 HEXIM1O94992 359 aaKnown RBP12.57□□□□□ -0.4
COPB1-208ENST00000532088 ATXN1LP0C7T5 689 aaKnown RBP12.57□□□□□ -0.4
COPB1-208ENST00000532088 ADRB3P13945 408 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 AVPR2P30518 371 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 LMAN1P49257 510 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 VPS41P49754 854 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 ELP6Q0PNE2 266 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 CDH17Q12864 832 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 CALCOCO2Q13137 446 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 SLC1A5Q15758 541 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 UGP2Q16851 508 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 FAXCQ5TGI0 409 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 IZUMO3Q5VZ72 239 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 HIBCHQ6NVY1 386 aaPredicted RBP12.57□□□□□ -0.4
COPB1-208ENST00000532088 LRRC8BQ6P9F7 803 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 USP45Q70EL2 814 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 C1orf210Q8IVY1 113 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 AADATQ8N5Z0 425 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 MEIOBQ8N635 442 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 EIF1ADQ8N9N8 165 aaKnown RBP12.57□□□□□ -0.4
COPB1-208ENST00000532088 HMGB4Q8WW32 186 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 SCRN2Q96FV2 425 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 C1QTNF1Q9BXJ1 281 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 FAM126AQ9BYI3 521 aaPredicted RBP12.57□□□□□ -0.4
COPB1-208ENST00000532088 PHACTR1Q9C0D0 580 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 TRABDQ9H4I3 376 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 SGK2Q9HBY8 427 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 MAGEE1Q9HCI5 957 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms