RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 LRRC8CQ8TDW0 803 aa3.29□□□□□ -1.88
ATM-217ENST00000531957 OTULINQ96BN8 352 aa3.29□□□□□ -1.88
ATM-217ENST00000531957 PGLYRP2Q96PD5 576 aa3.29□□□□□ -1.88
ATM-217ENST00000531957 TWNKQ96RR1 684 aa3.29□□□□□ -1.88
ATM-217ENST00000531957 RPS6KC1Q96S38 1066 aa3.29□□□□□ -1.88
ATM-217ENST00000531957 MMP28Q9H239 520 aa3.29□□□□□ -1.88
ATM-217ENST00000531957 RASSF1Q9NS23 344 aa3.29□□□□□ -1.88
ATM-217ENST00000531957 SNTG1Q9NSN8 517 aa3.29□□□□□ -1.88
ATM-217ENST00000531957 COMMD10Q9Y6G5 202 aa3.29□□□□□ -1.88
ATM-217ENST00000531957 P2RY10O00398 339 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 WNT9BO14905 357 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 PLRG1O43660 514 aaKnown RBP3.28□□□□□ -1.88
ATM-217ENST00000531957 NBNO60934 754 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 PAK4O96013 591 aaPredicted RBP3.28□□□□□ -1.88
ATM-217ENST00000531957 LDHAP00338 332 aaKnown RBP3.28□□□□□ -1.88
ATM-217ENST00000531957 CNPP09543 421 aaKnown RBP3.28□□□□□ -1.88
ATM-217ENST00000531957 CFC1BP0CG36 223 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 CFC1P0CG37 223 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 STX2P32856 288 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 EIF2S3P41091 472 aaKnown RBP3.28□□□□□ -1.88
ATM-217ENST00000531957 BLKP51451 505 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 NR1H2P55055 460 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 PHEXP78562 749 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 SLC20A2Q08357 652 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 DMP1Q13316 513 aaPredicted RBP3.28□□□□□ -1.88
ATM-217ENST00000531957 SLC12A1Q13621 1099 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 TRMT1LQ7Z2T5 733 aaKnown RBP3.28□□□□□ -1.88
ATM-217ENST00000531957 GPAT4Q86UL3 456 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 SPATA5Q8NB90 893 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 RUFY2Q8WXA3 655 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 SH3KBP1Q96B97 665 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 TTC14Q96N46 770 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 CD180Q99467 661 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 EYA3Q99504 573 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 MXRA8Q9BRK3 442 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 CSTL1Q9H114 145 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 TTYH1Q9H313 450 aaPredicted RBP3.28□□□□□ -1.88
ATM-217ENST00000531957 SCRT2Q9NQ03 307 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 DDX4Q9NQI0 724 aaKnown RBP3.28□□□□□ -1.88
ATM-217ENST00000531957 ZFP57Q9NU63 452 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 C1RLQ9NZP8 487 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 PEMTQ9UBM1 199 aa3.28□□□□□ -1.88
ATM-217ENST00000531957 CGNL1Q0VF96 1302 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 C16orf97H3BN30 126 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 ZG16O60844 167 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 NDUFB4O95168 129 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 ATP1A1P05023 1023 aaKnown RBP3.27□□□□□ -1.89
ATM-217ENST00000531957 G6PDP11413 515 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 CETPP11597 493 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 PCNAP12004 261 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 PTPN2P17706 415 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 MARK3P27448 753 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 GLIPR1P48060 266 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 CRIP2P52943 208 aaPredicted RBP3.27□□□□□ -1.89
ATM-217ENST00000531957 RELQ04864 619 aaPredicted RBP3.27□□□□□ -1.89
ATM-217ENST00000531957 GRIK3Q13003 919 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 ITGADQ13349 1161 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 KRT72Q14CN4 511 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 KRT71Q3SY84 523 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 CEP85LQ5SZL2 805 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 PMS2CLQ68D20 193 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 ANKRD54Q6NXT1 300 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.27□□□□□ -1.89
ATM-217ENST00000531957 ADGRG6Q86SQ4 1221 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 KLHDC8BQ8IXV7 354 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 LSM14AQ8ND56 463 aaKnown RBP3.27□□□□□ -1.89
ATM-217ENST00000531957 OR13A1Q8NGR1 328 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 BBS10Q8TAM1 723 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 SNAPC3Q92966 411 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 USP13Q92995 863 aaPredicted RBP3.27□□□□□ -1.89
ATM-217ENST00000531957 TBC1D20Q96BZ9 403 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 KXD1Q9BQD3 176 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 PHF7Q9BWX1 381 aaPredicted RBP3.27□□□□□ -1.89
ATM-217ENST00000531957 BABAM1Q9NWV8 329 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 TINAGQ9UJW2 476 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 NFE2L3Q9Y4A8 694 aa3.27□□□□□ -1.89
ATM-217ENST00000531957 IFNL4K9M1U5 179 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 BCAT2O15382 392 aaPredicted RBP3.26□□□□□ -1.89
ATM-217ENST00000531957 TIPRLO75663 272 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 RFPL2O75678 378 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 SLC22A3O75751 556 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 TCEA3O75764 348 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 MTA2O94776 668 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 SRCP12931 536 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 ETFAP13804 333 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 EIF2S3LQ2VIR3 472 aaKnown RBP3.26□□□□□ -1.89
ATM-217ENST00000531957 GRAMD1BQ3KR37 738 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 HIST2H2BCQ6DN03 193 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 FBXO46Q6PJ61 603 aaPredicted RBP3.26□□□□□ -1.89
ATM-217ENST00000531957 CCNI2Q6ZMN8 369 aaPredicted RBP3.26□□□□□ -1.89
ATM-217ENST00000531957 SLC26A9Q7LBE3 791 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 DSG4Q86SJ6 1040 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 FOXRED2Q8IWF2 684 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 PLD5Q8N7P1 536 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 LNX1Q8TBB1 728 aaPredicted RBP3.26□□□□□ -1.89
ATM-217ENST00000531957 NOC3LQ8WTT2 800 aaKnown RBP3.26□□□□□ -1.89
ATM-217ENST00000531957 SIN3AQ96ST3 1273 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 ARPC5LQ9BPX5 153 aa3.26□□□□□ -1.89
ATM-217ENST00000531957 REEP2Q9BRK0 252 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms