RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 PDK3Q15120 406 aa16.92■□□□□ 0.3
VPS26B-206ENST00000531741 SLC30A9Q6PML9 568 aa16.92■□□□□ 0.3
VPS26B-206ENST00000531741 COLGALT2Q8IYK4 626 aa16.92■□□□□ 0.3
VPS26B-206ENST00000531741 GALNT15Q8N3T1 639 aa16.92■□□□□ 0.3
VPS26B-206ENST00000531741 BHLHE22Q8NFJ8 381 aaPredicted RBP16.92■□□□□ 0.3
VPS26B-206ENST00000531741 ZFAND2BQ8WV99 257 aa16.92■□□□□ 0.3
VPS26B-206ENST00000531741 ANKRD49Q8WVL7 239 aa16.92■□□□□ 0.3
VPS26B-206ENST00000531741 PSMG2Q969U7 264 aa16.92■□□□□ 0.3
VPS26B-206ENST00000531741 PABPC5Q96DU9 382 aaKnown RBP16.92■□□□□ 0.3
VPS26B-206ENST00000531741 ASB9Q96DX5 294 aa16.92■□□□□ 0.3
VPS26B-206ENST00000531741 DCUN1D1Q96GG9 259 aa16.92■□□□□ 0.3
VPS26B-206ENST00000531741 LRGUKQ96M69 825 aa16.92■□□□□ 0.3
VPS26B-206ENST00000531741 KLHL5Q96PQ7 755 aa16.92■□□□□ 0.3
VPS26B-206ENST00000531741 CENPKQ9BS16 269 aa16.92■□□□□ 0.3
VPS26B-206ENST00000531741 Q9H521 79 aa16.92■□□□□ 0.3
VPS26B-206ENST00000531741 RAB26Q9ULW5 256 aa16.92■□□□□ 0.3
VPS26B-206ENST00000531741 PCDHB5Q9Y5E4 795 aa16.92■□□□□ 0.3
VPS26B-206ENST00000531741 SYN3O14994 580 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 UBDO15205 165 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 CFLARO15519 480 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 CHN2P52757 468 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 YBEYP58557 167 aaPredicted RBP16.91■□□□□ 0.3
VPS26B-206ENST00000531741 C1QTNF8P60827 252 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 PRAMEP78395 509 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 CRHR2Q13324 411 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 MTA1Q13330 715 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 DDR2Q16832 855 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 FBXL22Q6P050 247 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 UGT2A3Q6UWM9 527 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 PTAR1Q7Z6K3 402 aaPredicted RBP16.91■□□□□ 0.3
VPS26B-206ENST00000531741 ISCA2Q86U28 154 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 ZNF280BQ86YH2 543 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 RNF135Q8IUD6 432 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 HMGCLL1Q8TB92 370 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 HDAC10Q969S8 669 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 NPAS2Q99743 824 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 UNC93B1Q9H1C4 597 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 POPDC3Q9HBV1 291 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 CYP4F12Q9HCS2 524 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 PAPOLBQ9NRJ5 636 aaKnown RBP16.91■□□□□ 0.3
VPS26B-206ENST00000531741 UXTQ9UBK9 157 aaPredicted RBP16.91■□□□□ 0.3
VPS26B-206ENST00000531741 PCDHGA7Q9Y5G6 932 aa16.91■□□□□ 0.3
VPS26B-206ENST00000531741 MRPL42Q9Y6G3 142 aaKnown RBP16.91■□□□□ 0.3
VPS26B-206ENST00000531741 ENO4A6NNW6 628 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 HLA-DPA1P20036 260 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 FDXRP22570 491 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 SUOXP51687 545 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 ARSDP51689 593 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 CDKN2DP55273 166 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 PSME3P61289 254 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 USP46P62068 366 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 SERINC3Q13530 473 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 LRP8Q14114 963 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 LIN52Q52LA3 116 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 HACD2Q6Y1H2 254 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 PGBD5Q8N414 524 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 OR6P1Q8NGX9 317 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 USP13Q92995 863 aaPredicted RBP16.9■□□□□ 0.3
VPS26B-206ENST00000531741 IGSF8Q969P0 613 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 FEM1CQ96JP0 617 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 ASB2Q96Q27 587 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 TNFRSF12AQ9NP84 129 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.9■□□□□ 0.3
VPS26B-206ENST00000531741 EPS15L1Q9UBC2 864 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 TRAF6Q9Y4K3 522 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 CAPN8A6NHC0 703 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 MOXD2PA6NHM9 499 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 PSMD12O00232 456 aaPredicted RBP16.9■□□□□ 0.3
VPS26B-206ENST00000531741 RAMP2O60895 175 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 FGF1P05230 155 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 MAPKAPK2P49137 400 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 GPR15P49685 360 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 ACADVLP49748 655 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 RING1Q06587 406 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 EFEMP1Q12805 493 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 FASTKQ14296 549 aaKnown RBP16.9■□□□□ 0.3
VPS26B-206ENST00000531741 POLD3Q15054 466 aaPredicted RBP16.9■□□□□ 0.3
VPS26B-206ENST00000531741 CLLU1OSQ5K130 101 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 ZNF678Q5SXM1 525 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 SDHAF4Q5VUM1 108 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 FBXL19Q6PCT2 694 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 TMEM207Q6UWW9 146 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 GK5Q6ZS86 529 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 SLC24A5Q71RS6 500 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 TMA16Q96EY4 203 aaKnown RBP16.9■□□□□ 0.3
VPS26B-206ENST00000531741 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.9■□□□□ 0.3
VPS26B-206ENST00000531741 PIDD1Q9HB75 910 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 CACNA2D2Q9NY47 1150 aa16.9■□□□□ 0.3
VPS26B-206ENST00000531741 CNOT11Q9UKZ1 510 aaKnown RBP16.9■□□□□ 0.3
VPS26B-206ENST00000531741 STX16-NPEPL1H3BU86 382 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 RTN3O95197 1032 aaPredicted RBP16.89■□□□□ 0.29
VPS26B-206ENST00000531741 C8BP07358 591 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 YWHAQP27348 245 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 HSPA13P48723 471 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 FCGRTP55899 365 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 HERVK_113P63132 956 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 FAM189BP81408 668 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 ROR2Q01974 943 aaKnown RBP16.89■□□□□ 0.29
VPS26B-206ENST00000531741 TRAP1Q12931 704 aaKnown RBP16.89■□□□□ 0.29
VPS26B-206ENST00000531741 TRIM25Q14258 630 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms