RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 CFAP69A5D8W1 941 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 ARHGAP42A6NI28 874 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 EIF3CLB5ME19 914 aaKnown RBP12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 EEF2KO00418 725 aaKnown RBP12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 PALMO75781 387 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 ZIC2O95409 532 aaPredicted RBP12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 PCCBP05166 539 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 CCDC172P0C7W6 258 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 MAMLD1Q13495 774 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 MTM1Q13496 603 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 CA9Q16790 459 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 AFMIDQ63HM1 303 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 KCTD16Q68DU8 428 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 CLEC14AQ86T13 490 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 GKN2Q86XP6 184 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 ARFGAP1Q8N6T3 406 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 PLA2G15Q8NCC3 412 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 TSEN2Q8NCE0 465 aaKnown RBP12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 ATL2Q8NHH9 583 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 CCDC74AQ96AQ1 378 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 LIN37Q96GY3 246 aaPredicted RBP12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 WDR92Q96MX6 357 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 EIF3CQ99613 913 aaKnown RBP12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 TRIM5Q9C035 493 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 HSD3B7Q9H2F3 369 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 DHX35Q9H5Z1 703 aaKnown RBP12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 ATP13A3Q9H7F0 1226 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 PARVAQ9NVD7 372 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 KLQ9UEF7 1012 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 TRPM6Q9BX84 2022 aa12.89□□□□□ -0.35
TM9SF1-211ENST00000531406 TMCO5BA8MYB1 307 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 DAPK3O43293 454 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 RECQL5O94762 991 aaPredicted RBP12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 TNFP01375 233 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 RPLP0P05388 317 aaKnown RBP12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 ITGA2BP08514 1039 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 ATP1A3P13637 1013 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 PLA2G2AP14555 144 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 TNFAIP3P21580 790 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 PSMA2P25787 234 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 SERPINA4P29622 427 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 FANCCQ00597 558 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 BCL2L1Q07817 233 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 ERMARDQ5T6L9 678 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 PLEKHA7Q6IQ23 1121 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 PPP1R2P3Q6NXS1 205 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 RFX8Q6ZV50 586 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 B3GNT8Q7Z7M8 397 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 ZNF605Q86T29 641 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 ARHGAP12Q8IWW6 846 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 OR1E3Q8WZA6 343 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 FUBP1Q96AE4 644 aaKnown RBP12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 ECHDC3Q96DC8 303 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 PDXPQ96GD0 296 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 GFM1Q96RP9 751 aaKnown RBP12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 KCTD15Q96SI1 283 aaPredicted RBP12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 RBM15Q96T37 977 aaKnown RBP eCLIP12.88□□□□□ -0.354e-8■■■■■ 42.2
TM9SF1-211ENST00000531406 PCSK1NQ9UHG2 260 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 DGKBQ9Y6T7 804 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 MGAQ8IWI9 3026 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 ZNF462Q96JM2 2506 aa12.88□□□□□ -0.35
TM9SF1-211ENST00000531406 A0A1W2PQM1 296 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 TMEM202A6NGA9 273 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 TMEM191CA6NGB0 347 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 CAPN8A6NHC0 703 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 D6RAR5 112 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 TMX2-CTNND1H3BSU7 103 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 DFFAO00273 331 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 CACNB4O00305 520 aaPredicted RBP12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 PLD2O14939 933 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 ATMINO43313 823 aaPredicted RBP12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 ERCC2P18074 760 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 UBASH3AP57075 661 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 KIAA1024LP59773 190 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 CCL7P80098 99 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 NSUN2Q08J23 767 aaKnown RBP eCLIP12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 RALGDSQ12967 914 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 CLN3Q13286 438 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 RFTN1Q14699 578 aaPredicted RBP12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 OGFOD3Q6PK18 319 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 LIPIQ6XZB0 460 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 ARHGAP36Q6ZRI8 547 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 DPPA4Q7L190 304 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 RAB11FIP2Q7L804 512 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 FBXO39Q8N4B4 442 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 GPR156Q8NFN8 814 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 OR6C4Q8NGE1 309 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 OR56A4Q8NGH8 313 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 TTC9Q92623 222 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 NSMCE3Q96MG7 304 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 PEBP4Q96S96 227 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 SNRNP25Q9BV90 132 aaKnown RBP12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 CINPQ9BW66 212 aaPredicted RBP12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 EPB41L5Q9HCM4 733 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 FGF22Q9HCT0 170 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 MYO6Q9UM54 1294 aa12.87□□□□□ -0.35
TM9SF1-211ENST00000531406 K7ENP7 123 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 TRAFD1O14545 582 aaPredicted RBP12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 TEX33O43247 280 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms