RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), human

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD44-231	ENST00000531110	GNAZ	P19086	355 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	ACAT1	P24752	427 aa	Known RBP	5.73	□□□□□ -1.49
CD44-231	ENST00000531110	ACVR2A	P27037	513 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	PKLR	P30613	574 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	CASP14	P31944	242 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	EVI2B	P34910	448 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	CTNNA1	P35221	906 aa	Known RBP	5.73	□□□□□ -1.49
CD44-231	ENST00000531110	PTDSS1	P48651	473 aa	Known RBP	5.73	□□□□□ -1.49
CD44-231	ENST00000531110	ALDH9A1	P49189	494 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	TUFM	P49411	452 aa	Known RBP	5.73	□□□□□ -1.49
CD44-231	ENST00000531110	CARS	P49589	748 aa	Known RBP	5.73	□□□□□ -1.49
CD44-231	ENST00000531110	BCAT1	P54687	386 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	NOP14	P78316	857 aa	Known RBP	5.73	□□□□□ -1.49
CD44-231	ENST00000531110	SCRN3	Q0VDG4	424 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	SMARCB1	Q12824	385 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	CCNI	Q14094	377 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	ARHGEF7	Q14155	803 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	PTK2B	Q14289	1009 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	SLC29A2	Q14542	456 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	OASL	Q15646	514 aa	Known RBP	5.73	□□□□□ -1.49
CD44-231	ENST00000531110	SMN1	Q16637	294 aa	Known RBP	5.73	□□□□□ -1.49
CD44-231	ENST00000531110	PARP6	Q2NL67	630 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	P3H1	Q32P28	736 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	CNPY1	Q3B7I2	92 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	LIN52	Q52LA3	116 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	5.73	□□□□□ -1.49
CD44-231	ENST00000531110	VWA5B1	Q5TIE3	1220 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	MZT2A	Q6P582	158 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	TMEM154	Q6P9G4	183 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	KDELC1	Q6UW63	502 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	KIF6	Q6ZMV9	814 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	STOX1	Q6ZVD7	989 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	RTL10	Q7L3V2	364 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	MAVS	Q7Z434	540 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	PATL1	Q86TB9	770 aa	Known RBP	5.73	□□□□□ -1.49
CD44-231	ENST00000531110	DPP9	Q86TI2	863 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	NLRP14	Q86W24	1093 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	LONP2	Q86WA8	852 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	CDH26	Q8IXH8	852 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	ST13P4	Q8IZP2	240 aa	Predicted RBP	5.73	□□□□□ -1.49
CD44-231	ENST00000531110	ABRA	Q8N0Z2	381 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	CPSF7	Q8N684	471 aa	Known RBP	5.73	□□□□□ -1.49
CD44-231	ENST00000531110	ALLC	Q8N6M5	410 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	EIF1AD	Q8N9N8	165 aa	Known RBP	5.73	□□□□□ -1.49
CD44-231	ENST00000531110	MINDY2	Q8NBR6	621 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	RAPGEF4	Q8WZA2	1011 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	SNX22	Q96L94	193 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	CFAP57	Q96MR6	1250 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	XPO6	Q96QU8	1125 aa	Known RBP	5.73	□□□□□ -1.49
CD44-231	ENST00000531110	CCT8L2	Q96SF2	557 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	MYD88	Q99836	296 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	SELENOO	Q9BVL4	669 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	KRTAP4-5	Q9BYR2	181 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	OR51B5	Q9H339	312 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	LRRC19	Q9H756	370 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	C10orf88	Q9H8K7	445 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	DDX43	Q9NXZ2	648 aa	Known RBP	5.73	□□□□□ -1.49
CD44-231	ENST00000531110	BAIAP2L1	Q9UHR4	511 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	GABRQ	Q9UN88	632 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	SNX13	Q9Y5W8	968 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	STON1	Q9Y6Q2	735 aa		5.73	□□□□□ -1.49
CD44-231	ENST00000531110	ABCC8	Q09428	1581 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	ATP7B	P35670	1465 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	RPRD2	Q5VT52	1461 aa	Known RBP	5.72	□□□□□ -1.49
CD44-231	ENST00000531110	ARAP1	Q96P48	1450 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	CPD	O75976	1380 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	LOC100653049	A0A140TA62	436 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110		A0A1B0GVL5	298 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	GOLGA8IP	A6NC78	632 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	USP27X	A6NNY8	438 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	hCG_1984214	I3L0E3	225 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110		M0R3H8	397 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	APAF1	O14727	1248 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	PFDN6	O15212	129 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	PMM2	O15305	246 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	ZW10	O43264	779 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	ECE2	O60344	883 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	HSF2BP	O75031	334 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	ATP5H	O75947	161 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	KRT34	O76011	436 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	PRKCB	P05771	671 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	KRT3	P12035	628 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	GLUL	P15104	373 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	PDGFRA	P16234	1089 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	CTNNA2	P26232	953 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	IL1R2	P27930	398 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	PPARG	P37231	505 aa	Predicted RBP	5.72	□□□□□ -1.49
CD44-231	ENST00000531110	PIK3CB	P42338	1070 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	GSS	P48637	474 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	HARS2	P49590	506 aa	Known RBP	5.72	□□□□□ -1.49
CD44-231	ENST00000531110	CLK3	P49761	638 aa	Known RBP	5.72	□□□□□ -1.49
CD44-231	ENST00000531110	CPT1A	P50416	773 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	RCAN1	P53805	252 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	PRKAG1	P54619	331 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	ELL	P55199	621 aa	Predicted RBP	5.72	□□□□□ -1.49
CD44-231	ENST00000531110	MAP3K7CL	P57077	242 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	PRKCE	Q02156	737 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	GOLGA8F	Q08AF8	430 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	ZNF543	Q08ER8	600 aa		5.72	□□□□□ -1.49
CD44-231	ENST00000531110	GOLGA8DP	Q0D2H9	430 aa		5.72	□□□□□ -1.49

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