RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 DDIASQ8IXT1 998 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 CMTR2Q8IYT2 770 aaKnown RBP8.17□□□□□ -1.1
CSDE1-214ENST00000530886 SHCBP1Q8NEM2 672 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 TRPV3Q8NET8 790 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 TAS1R2Q8TE23 839 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 DEPDC1BQ8WUY9 529 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 MRM3Q9HC36 420 aaKnown RBP8.17□□□□□ -1.1
CSDE1-214ENST00000530886 XPNPEP3Q9NQH7 507 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 ADAM28Q9UKQ2 775 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 OAZ3Q9UMX2 235 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 ADGRA2Q96PE1 1338 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 HMX3A6NHT5 357 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 AGAP5A6NIR3 686 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 C12orf71A8MTZ7 269 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 PDZK1P1A8MUH7 402 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 ZNF99A8MXY4 864 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-214ENST00000530886 CAPN5O15484 640 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-214ENST00000530886 TRIM13O60858 407 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 CDK14O94921 469 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 CLIC3O95833 236 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 AMHP03971 560 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 CALB1P05937 261 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 TPSB2P20231 275 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 KDELR1P24390 212 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 PRKAA1Q13131 559 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 MFSD10Q14728 455 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 TPSAB1Q15661 275 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 MAPK11Q15759 364 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 LEXMQ3ZCV2 418 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 REP15Q6BDI9 236 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 METTL2BQ6P1Q9 378 aaKnown RBP8.17□□□□□ -1.1
CSDE1-214ENST00000530886 CLEC14AQ86T13 490 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 ANKRD52Q8NB46 1076 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 PSMA8Q8TAA3 256 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 ZNF516Q92618 1163 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 ZNF566Q969W8 418 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 ROPN1LQ96C74 230 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 FAF2Q96CS3 445 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 TM9SF2Q99805 663 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 KCTD14Q9BQ13 255 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-214ENST00000530886 SDCBP2Q9H190 292 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 WDR55Q9H6Y2 383 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-214ENST00000530886 GPRC5CQ9NQ84 441 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 NDFIP2Q9NV92 336 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 MTMR10Q9NXD2 777 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 PCSK1NQ9UHG2 260 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 MID2Q9UJV3 735 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.17□□□□□ -1.1
CSDE1-214ENST00000530886 SNX7Q9UNH6 387 aa8.17□□□□□ -1.1
CSDE1-214ENST00000530886 HPRP00739 348 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 CAPN1P07384 714 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 HSD17B1P14061 328 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 DNAJB1P25685 340 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 PSMA4P25789 261 aaKnown RBP8.16□□□□□ -1.1
CSDE1-214ENST00000530886 ELK4P28324 431 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 SHMT1P34896 483 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 RFC2P35250 354 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 HTR2BP41595 481 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 RAP1GAPP47736 663 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 ACTR2P61160 394 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 ROR1Q01973 937 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 FADDQ13158 208 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 Q5BKY6 102 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 AGAP9Q5VTM2 703 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 TRMT10BQ6PF06 316 aaKnown RBP8.16□□□□□ -1.1
CSDE1-214ENST00000530886 MAMSTRQ6ZN01 415 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 HDDC2Q7Z4H3 204 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 R3HCC1LQ7Z5L2 792 aaKnown RBP8.16□□□□□ -1.1
CSDE1-214ENST00000530886 THAP5Q7Z6K1 395 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 CCDC103Q8IW40 242 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 METTL4Q8N3J2 472 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 NDNFQ8TB73 568 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 BLOC1S5Q8TDH9 187 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 SLC22A17Q8WUG5 538 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 PROX1Q92786 737 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 IDI2Q9BXS1 227 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 PCIF1Q9H4Z3 704 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 TIGARQ9NQ88 270 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 CYP26B1Q9NR63 512 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 FBXL12Q9NXK8 326 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 IL37Q9NZH6 218 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 SAE1Q9UBE0 346 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-214ENST00000530886 F8VP50 259 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 ZNF780AO75290 641 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-214ENST00000530886 CYP2A7P20853 494 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 ARNTP27540 789 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 CSTF2P33240 577 aaKnown RBP eCLIP8.16□□□□□ -1.1
CSDE1-214ENST00000530886 ZNF76P36508 570 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 ETV1P50549 477 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 NRLP54845 237 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 OR2B6P58173 313 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 SMARCB1Q12824 385 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 BAMBIQ13145 260 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 GPR50Q13585 617 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 NOXA1Q86UR1 476 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 KIAA0319LQ8IZA0 1049 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 APBA2Q99767 749 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 KIFC3Q9BVG8 833 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 OXSMQ9NWU1 459 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 PAQR5Q9NXK6 330 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms